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Pull requests: openpipelines-bio/openpipeline

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Pull requests list

Fix leiden hanging when insufficient shared memory is available.
#989 opened Mar 25, 2025 by DriesSchaumont Loading…
5 of 10 tasks
2.1.0
update modality handling in harmony_knn workflow
#988 opened Mar 24, 2025 by dorien-er Loading…
3 of 10 tasks
Remove scArches functionality from scANVI component
#986 opened Mar 18, 2025 by dorien-er Loading…
5 of 10 tasks
2.1.0
Add basic integration tests for process_samples
#967 opened Feb 11, 2025 by DriesSchaumont Loading…
4 of 10 tasks
4
Update scArches: align query with reference model
#964 opened Jan 31, 2025 by dorien-er Loading…
5 of 10 tasks
Scvi knn annotation workflow
#954 opened Jan 14, 2025 by dorien-er Loading…
4 of 10 tasks
2.1.0
scanvi annotation workflow
#898 opened Nov 15, 2024 by dorien-er • Draft
10 tasks
bbknn knn workflow
#891 opened Oct 18, 2024 by dorien-er • Draft
4 of 10 tasks
Cell type annotation: scanorama knn workflow
#884 opened Sep 23, 2024 by dorien-er • Draft
3 of 10 tasks
openproblems interoperability POC
#883 opened Sep 20, 2024 by rcannood • Draft
10 tasks
Add atac_marker_peaks component
#879 opened Sep 17, 2024 by VladimirShitov Loading…
3 of 10 tasks
3.0.0
@DriesSchaumont
3
integration QC workflow
#795 opened Apr 26, 2024 by dorien-er • Draft
10 tasks
@dorien-er
Add dsb component
#588 opened Oct 17, 2023 by wxicu • Draft
5 of 10 tasks
@rcannood
9
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