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Pull requests list

scvi_leiden: add support for writing to a tileDB database.
#1094 opened Oct 23, 2025 by DriesSchaumont Loading…
4 of 10 tasks
cluster/leiden: fix using modality with missing .X
#1093 opened Oct 23, 2025 by DriesSchaumont Loading…
5 of 10 tasks
Refactor totalvi
#1092 opened Oct 21, 2025 by dorien-er Loading…
5 of 10 tasks
1
enable cuda acceleration for celltypist
#1091 opened Oct 17, 2025 by dorien-er Loading…
10 tasks
make gene name sanitation optional
#1084 opened Oct 9, 2025 by dorien-er Loading…
4 of 10 tasks
4
add lognormalization to celltypist component
#1083 opened Oct 9, 2025 by dorien-er Loading…
5 of 10 tasks
Update scanpy and related components
#1074 opened Sep 15, 2025 by DriesSchaumont • Draft
10 tasks
Fix normalization checks
#1072 opened Sep 8, 2025 by dorien-er Loading…
10 tasks
2
Update file examples
#1067 opened Aug 22, 2025 by dorien-er • Draft
10 tasks
4
ingestion/cellranger_multi: avoid publishing duplicate Cell Ranger output
#1048 opened Jul 10, 2025 by DriesSchaumont • Draft
4 of 10 tasks
Add documentation render to integration test CI
#1005 opened Apr 23, 2025 by DriesSchaumont • Draft
3 of 10 tasks
openproblems interoperability POC
#883 opened Sep 20, 2024 by rcannood • Draft
10 tasks
Add atac_marker_peaks component
#879 opened Sep 17, 2024 by VladimirShitov Loading…
3 of 10 tasks
3.0.0
@DriesSchaumont
3
Add dsb component
#588 opened Oct 17, 2023 by wxicu • Draft
5 of 10 tasks
@rcannood
9
ProTip! What’s not been updated in a month: updated:<2025-09-24.