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Reactome

A curated pathway database

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  1. reactome2py reactome2py Public

    python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

    Python 27 10

  2. ReactomeGSA ReactomeGSA Public

    R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

    R 22 4

  3. graph-core graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    Java 18 7

  4. pwp-browser pwp-browser Public

    A tool for visualising and interacting with pathways data

    Java 10 7

  5. content-service content-service Public

    The new Reactome REST API to access the data

    Java 10 5

  6. container container Public

    🚧 Repository for files for running a Reactome production-like environment inside a docker container. Currently, this project's status is "Work-In-Progress". 🚧

    Perl 9 4

Repositories

Showing 10 of 127 repositories
  • release_gocam Public

    This pipeline generates go-cam ttl files from biopax and validates them

    reactome/release_gocam’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Nov 7, 2024
  • ReactomeGSA Public

    R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

    reactome/ReactomeGSA’s past year of commit activity
    R 22 4 21 1 Updated Nov 7, 2024
  • data-export Public

    Creates the files to be placed in the download section

    reactome/data-export’s past year of commit activity
    Java 2 2 2 0 Updated Nov 6, 2024
  • reactome/search-core’s past year of commit activity
    Java 1 2 0 0 Updated Nov 6, 2024
  • graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    reactome/graph-core’s past year of commit activity
    Java 18 7 1 0 Updated Nov 6, 2024
  • report-logger Public

    Centralises different events across various services for periodic report

    reactome/report-logger’s past year of commit activity
    Java 1 0 0 0 Updated Nov 6, 2024
  • reactome/sbml-exporter’s past year of commit activity
    Java 0 1 0 0 Updated Nov 6, 2024
  • reactome/search-indexer’s past year of commit activity
    Java 0 3 0 1 Updated Nov 6, 2024
  • content-service Public

    The new Reactome REST API to access the data

    reactome/content-service’s past year of commit activity
    Java 10 5 1 1 Updated Nov 6, 2024
  • reactome/popularpathways’s past year of commit activity
    Java 0 0 0 0 Updated Nov 6, 2024