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openproblems-bio / task_grn_inference Public

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Test

small changes to improve viash test #274

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small changes to improve viash test

small changes to improve viash test #274

Summary
Jobs
- List components to test
  
  Test (ppcor, grn_methods, src/methods/single_omics/ppcor/config.vsh.yaml, src/methods/single_omic...
  
  Test (scprint, grn_methods, src/methods/single_omics/scprint/config.vsh.yaml, src/methods/single_...
  
  Test (scenic, grn_methods, src/methods/single_omics/scenic/config.vsh.yaml, src/methods/single_om...
  
  Test (grnboost2, grn_methods, src/methods/single_omics/grnboost2/config.vsh.yaml, src/methods/sin...
  
  Test (scgpt, grn_methods, src/methods/single_omics/scgpt/config.vsh.yaml, src/methods/single_omic...
  
  Test (portia, grn_methods, src/methods/single_omics/portia/config.vsh.yaml, src/methods/single_om...
  
  Test (scenicplus, grn_methods, src/methods/multi_omics/scenicplus/config.vsh.yaml, src/methods/mu...
  
  Test (celloracle, grn_methods, src/methods/multi_omics/celloracle/config.vsh.yaml, src/methods/mu...
  
  Test (scglue, grn_methods, src/methods/multi_omics/scglue/config.vsh.yaml, src/methods/multi_omic...
  
  Test (metrics_all, metrics, src/metrics/all_metrics/config.vsh.yaml, src/metrics/all_metrics/, py...
  
  Test (ws_distance, metrics, src/metrics/wasserstein/config.vsh.yaml, src/metrics/wasserstein/, py...
  
  Test (regression_2, metrics, src/metrics/regression_2/config.vsh.yaml, src/metrics/regression_2/,...
  
  Test (regression_1, metrics, src/metrics/regression_1/config.vsh.yaml, src/metrics/regression_1/,...
  
  Test (pearson_corr, control_methods, src/control_methods/pearson_corr/config.vsh.yaml, src/contro...
  
  Test (negative_control, control_methods, src/control_methods/negative_control/config.vsh.yaml, sr...
  
  Test (positive_control, control_methods, src/control_methods/positive_control/config.vsh.yaml, sr...
Run details
- Usage
- Workflow file

Usage Workflow file

Annotations

1 error

Run test

Process completed with exit code 1.

test / Test (scgpt, grn_methods, src/methods/single_omics/scgpt/config.vsh.yaml, src/methods/single_omic...

failed Feb 6, 2025 in 7m 12s

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