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TableInfo: ptm_subtype.tsv

Mano Maurya edited this page May 29, 2025 · 2 revisions

The ptm_subtype.tsv table will have as many rows as the number of unique ptm_subtype terms appearing in the ptm_subtype column of ptm.tsv. This table can be empty (header-row only).

Field Field Description Required? Field Value Type Extra Info
id A valid ptm_subtype ID from Gene Ontology Required string Example: GO:0006493
name A short, human-readable, machine-readable label for this Gene Ontology term Required string protein O-linked glycosylation
description A human-readable description of this Gene Ontology term Optional string Please note that ptm_type and ptm_subtype are related in a hierarchy. For example, if ptm_type is GO:0006486, then ptm_subtype will be one of the subentries of GO:0006486 but not the regulation terms, e.g., GO:0006493. Similarly, if ptm_type is GO:0006468, then ptm_subtype will be one of its subentries, such as GO:0007258.
synonyms A list of synonyms for this term as identified by the Gene Ontology metadata Optional JSON array of strings Example: ["text1", "text2"]. Provide an empty JSON array [] if a value is null.
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