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TableInfo: id_namespace.tsv
Amanda Charbonneau edited this page Mar 4, 2021
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A table listing identifier namespaces registered by the DCC submitting this C2M2 instance
Each id_namespace is the unique identifier for your program, or some subset of your program, that identifies it as your data
The id_namespace table will contain one row per namespace in your Program
Field | Field Description | Required? | Attributes | Extra Info |
---|---|---|---|---|
id | A globally unique ID representing this identifier namespace | Required | Every row must have a value; Value type is string | In the simplest case, your program would use the exact same value for the id_namespace column in every row for every table. More complex Programs may choose to use multiple namespaces. |
abbreviation | A very short display label for this namespace | Non-required: Any number of rows after the header can be filled | Value should be 10 characters or fewer; The value in each row must be different | This is the display abbreviation for this namespace in the portal |
name | A short, human-readable, machine-read-friendly label for this namespace | Non-required: Any number of rows after the header can be filled | Value can be any string; The value in each row must be different | This is the display name for this namespace in the portal |
description | A human-readable description of this namespace | Non-required: Any number of rows after the header can be filled | Value type is string | This is the display descripton for this namespace in the portal |
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Tutorials
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C2M2 Table Guide
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Table Summary
- analysis_type.tsv
- anatomy.tsv
- assay_type.tsv
- biofluid.tsv
- biosample.tsv
- biosample_disease.tsv
- biosample_from_subject.tsv
- biosample_gene.tsv
- biosample_in_collection.tsv
- biosample_ptm.tsv
- biosample_substance.tsv
- collection.tsv
- collection_anatomy.tsv
- collection_biofluid.tsv
- collection_compound.tsv
- collection_defined_by_project.tsv
- collection_disease.tsv
- collection_gene.tsv
- collection_in_collection.tsv
- collection_phenotype.tsv
- collection_protein.tsv
- collection_ptm.tsv
- collection_substance.tsv
- collection_taxonomy.tsv
- compound.tsv
- data_type.tsv
- dcc.tsv (formerly
primary_dcc_contact.tsv
- disease.tsv
- domain_location.tsv
- file.tsv
- file_describes_biosample.tsv
- file_describes_collection.tsv
- file_describes_subject.tsv
- file_format.tsv
- file_in_collection.tsv
- gene.tsv
- id_namespace.tsv
- ncbi_taxonomy.tsv
- phenotype.tsv
- phenotype_disease.tsv
- phenotype_gene.tsv
- project.tsv
- project_in_project.tsv
- protein.tsv
- protein_gene.tsv
- ptm.tsv
- ptm_type.tsv
- ptm_subtype.tsv
- sample_prep_method.tsv
- subject.tsv
- subject_disease.tsv
- subject_in_collection.tsv
- subject_phenotype.tsv
- subject_race.tsv
- subject_role_taxonomy.tsv
- subject_substance.tsv
- substance.tsv
- Reference Tables
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Table Summary