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mazzalab committed May 18, 2024
2 parents b714afa + f9c2547 commit 9aed2d5
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions Singularity.def
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,6 @@ From: condaforge/mambaforge
PATH=$PATH:/tmp/jre1.8.0_161/bin/

%post
mamba config --set channel_priority strict
mamba install python=3.10
mamba install -c conda-forge -c bioconda snakemake=7.32.3 -y
mamba install -c conda-forge colorama click -y
Expand Down Expand Up @@ -44,4 +43,4 @@ From: condaforge/mambaforge
else
echo "You must provide three + 2 optional arguments [computing mode ('paired' or 'single'), # of cores (int), sample name (string), chunk size (optional, int), ASCII offset (optional, 33 or 64)]"
exit 1
fi
fi

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