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Fix Singularity script
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mazzalab committed May 18, 2024
1 parent e7d7581 commit b714afa
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/singularity_reusable.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ jobs:
- name: Build a singularity container
run: singularity build --fakeroot fastqwiper.sif Singularity.def
- name: Test the singularity container
run: singularity run fastqwiper.sif help
run: singularity run fastqwiper.sif
- uses: "finnp/create-file-action@master"
env:
FILE_NAME: "token.txt"
Expand All @@ -33,6 +33,6 @@ jobs:
- name: Push artifacts to Library
run: |
singularity remote login --tokenfile token.txt
singularity key newpair --password= --name="Tommaso Mazza" --comment="Deployment keys" --email=t.mazza@css-mendel.it --push=false
singularity key newpair --password= --name="Tommaso Mazza" --comment="Deployment keys" --email=t.mazza@operapadrepio.it --push=false
singularity sign fastqwiper.sif
singularity push fastqwiper.sif library://mazzalab/fastqwiper/fastqwiper.sif:${{ inputs.package_version }}

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