1.67.0

Added

• Slider, reset, and more for cell filtering by numeric annotations (#1988, #1989, #1990)

Changed

• User bookmarks refinements (#1985)

Fixed

• Fix pagination control UI in DE table (#1984)

1.66.0

Added

• Bookmark feature for saving views (#1979, #1982)
• Cell filtering by numeric annotations: basic UI (feature flagged, #1980)

Changed

• Bump nokogiri from 1.15.4 to 1.16.2 (#1978)

Fixed

• Fix global search UI bugs in filter clear button, pagination controls (#1981, #1984)

1.65.1

Fixed

• Validation/state issues when using the AnnData upload UX (#1973)
• Occasional Explore UI break due to cell filtering (#1976)

1.65.0

Added

• Cell filtering support for violin plots (#1965)
• Show reference expression by tissue in related genes ideogram (#1966)
• Client library for cell filtering by numeric annotations (#1972)
• New attributes/events in Mixpanel for AnnData ingest (#1971)

Changed

• Bump vite from 2.9.16 to 2.9.17 (#1969)
• Update data transfer instructions to use gcloud storage (#1970)
• Update to rails-baseimage:2.2.2 (#1974)

Fixed

• Switched test project for HCA tests to improve stability (#1968)

1.64.0

Added

• Support for numeric annotations in cell filtering API requests (#1958)
• Extending ImportService (#1955)
• Provide GS URL/bucket path to file directly in Upload Wizard (#1963)
• Refine image pipeline: limit to top genes, generalize plot scale (#1960)
• Speed up cell filtering for non-default annotations (#1962)

Changed

• Skip reporting 401 errors when getting user groups re: terms of service compliance (#1961)
• Update puma to 5.6.8 (#1964)

1.63.1

Added

Changed

• Improve error handling for getting Terra user groups (#1957)

Fixed

• Ensure user is registered for Terra before checking terms of service status (#1953)
• Skip extra 200 check on deployments (#1952)
• Only read 1 megabyte of any log file for email delivery (#1956)

1.63.0

Added

• Improve ingest robustness for very large matrices, via scp-ingest-pipeline:1.28.4 (#1949)
• Improve UX for cell filter linking (#1950)

Changed

• Update to new Terra terms of service endpoints (#1944)
• Migrate Jenkins CD functionality to GitHub Actions (#1945, #1948)
• Bump carrierwave from 2.2.1 to 2.2.5 (#1943)
• Bump @adobe/css-tools from 4.3.1 to 4.3.2 (#1947)

Fixed

• Refine observability for "u.json is not a function" (#1946)

1.62.0

Added

• Enable links to cell filtering (#1942)

Changed

• Make default color profile Viridis (#1939)
• Skip frequently failing test for Orchestration smoke test build (#1938)

Fixed

• Avoid sparkbars in menus, and fix narrow edge case (#1936)
• Address rendering loop when no gene header is found in author DE file (#1937)
• Ingest scalability for extremely large, dense expression matrices (#1940)
• Expression data cache for gene names with slashes (#1940)
• Unexpectedly reset cell filters after clicking legend entry (#1942)

1.61.0

Added

• Sparkbars to show proportion of cells filtered (#1931, #1935)

Changed

• Enlarge plots and space for content (#1860)

Fixed

• Metadata validation issues, via update to scp-ingest-pipeline:1.28.2 (#1934)

1.60.0

Added

• Sort cell filters by count, enable sorting by label (#1922)
• ImportService prototype (#1925)

Changed

• Updating to scp-ingest-pipeline:1.28.1 (#1928)

Fixed

• Cell filtering when data has "--Unspecified--" group (#1926)