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change to public docker from tag-public
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stellaning1120 committed May 30, 2024
1 parent dd0d44e commit 852be3e
Showing 1 changed file with 17 additions and 17 deletions.
34 changes: 17 additions & 17 deletions CODEC/SingleSampleCODEC.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -241,7 +241,7 @@ task SplitFastq1 {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
memory: memory + " GB"
disks: "local-disk " + disk_size + " HDD"
}
Expand All @@ -268,7 +268,7 @@ task SplitFastq2 {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
memory: memory + " GB"
disks: "local-disk " + disk_size + " HDD"
}
Expand All @@ -293,7 +293,7 @@ task Trim {

}
runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
memory: mem + " GB"
}
Expand Down Expand Up @@ -337,7 +337,7 @@ task AlignRawTrimmed {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
memory: mem + " GB"
disks: "local-disk " + disk_size + " HDD"
preemptible: 3
Expand Down Expand Up @@ -376,7 +376,7 @@ task ZipperBamAlignment {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
memory: select_first([mem, 8]) + " GB"
disks: "local-disk " + select_first([disk_size, 16]) + " HDD"
preemptible: 3
Expand All @@ -403,7 +403,7 @@ task MergeSplit {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
memory: memory + " GB"
}
Expand All @@ -427,7 +427,7 @@ task MergeLogSplit {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
memory: mem + " GB"
}
Expand All @@ -450,7 +450,7 @@ task SortBam {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
memory: mem + " GB"
preemptible: 2
Expand All @@ -476,7 +476,7 @@ task ByProductMetrics {
}

runtime {
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
memory: mem + " GB"
}
Expand Down Expand Up @@ -509,7 +509,7 @@ task ReplaceRawReadGroup {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
}
}
Expand Down Expand Up @@ -537,7 +537,7 @@ task CollectInsertSizeMetrics {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
}
}
Expand Down Expand Up @@ -568,7 +568,7 @@ task GroupReadByUMI {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
}
}
Expand Down Expand Up @@ -598,7 +598,7 @@ task FgbioCollapseReadFamilies {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
}
}
Expand Down Expand Up @@ -633,7 +633,7 @@ task AlignMolecularConsensusReads {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
cpu: cpu_cores
preemptible: 3
Expand Down Expand Up @@ -670,7 +670,7 @@ task MergeAndSortMoleculeConsensusReads {

runtime {
memory: memory+ " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
preemptible: 3
}
Expand Down Expand Up @@ -701,7 +701,7 @@ task CollectWgsMetrics {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
preemptible: 3
}
Expand Down Expand Up @@ -762,7 +762,7 @@ task CSS_SFC_ErrorMetrics {

runtime {
memory: memory + " GB"
docker: "us.gcr.io/tag-team-160914/codec:v1"
docker: "us.gcr.io/tag-public/codec:v1.1.1"
disks: "local-disk " + disk_size + " HDD"
preemptible: 3
}
Expand Down

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