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correct docker images
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stellaning1120 committed May 29, 2024
1 parent 21cf843 commit dd0d44e
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions CODEC/codec_bcl2fastq.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -40,15 +40,15 @@ task GetBclBucketSize {
}

command <<<
gsutil du -s ${input_bcl_directory} | awk '{print $1/1024/1024/1024}' > input_bcl_size.txt
gsutil du -sh ${input_bcl_directory} | awk '{print $1/1024/1024/1024}' > input_bcl_size.txt
>>>

output {
Float input_bcl_size = read_float("input_bcl_size.txt")
}

runtime {
docker: "us-central1-docker.pkg.dev/tag-team-160914/gptag-dockers/bcl2fastq_codec:v1"
docker: "us.gcr.io/tag-public/bcl2fastq_codec:v1"
memory: memory + " GB"
disks: "local-disk 16 HDD"
}
Expand Down Expand Up @@ -108,7 +108,7 @@ task run_bcl2fastq {
}

runtime {
docker: "us-central1-docker.pkg.dev/tag-team-160914/gptag-dockers/bcl2fastq_codec:v1"
docker: "us.gcr.io/tag-public/bcl2fastq_codec:v1"
memory: memory
bootDiskSizeGb: 12
disks: "local-disk ${disk_space} HDD"
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