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added chapter on pixi #68

Merged
merged 5 commits into from
Feb 13, 2025
Merged

added chapter on pixi #68

merged 5 commits into from
Feb 13, 2025

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amrei-bp
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Hej!
I added a chapter on Pixi, based on the session we had today. It gives an overview of most of the topics we talked about, with code, and should be able to get people started.

@mahesh-panchal mahesh-panchal self-requested a review January 21, 2025 14:58
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There's a few things that need to be changed before merging this.

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```{.bash}
pixi self-update
```

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Include pixi clean cache and pixi search here too.

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how does pixi search work?

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@mahesh-panchal mahesh-panchal linked an issue Jan 22, 2025 that may be closed by this pull request
@LucileSol
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So can we merge or there are still things to modify? I can review and merge

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I'm making some adjustments.

@mahesh-panchal mahesh-panchal merged commit 8dc603c into NBISweden:main Feb 13, 2025
mahesh-panchal pushed a commit that referenced this pull request Feb 13, 2025
* Add chapter on pixi

* incorporated the other changes suggested by mahesh-panchal
mahesh-panchal added a commit that referenced this pull request Feb 13, 2025
* Add Gitpod qmd (#48)

* gitpod login instructions

* gitpod login

* remove names

* Update gitpod.qmd - Gitpod uses (#52)

* what is gitpod (#56)

* what is gitpod

* Update gitpod.qmd

Adding a sentence about the ".gitpod.yml" file

* Update section on configuration in gitpod.qmd (#60)

* edit_how_to_start_agitpod.qmd (#51)

* Update Schedule

* Update schedule

* Add Git cheetsheet (#43)

* Add quarto introduction lecture

* Add learner/review pairs

* Update Render vs Preview

* Update intro.qmd

* Add section on quarto computatations

* Apply code review fixes for Quarto syntax

* Add reference in figure example

* Update intro.qmd - The Quarto CLI

initial commit section: The Quarto CLI

* Add section on document formats

* Update quarto/intro.qmd

Co-authored-by: Mahesh Binzer-Panchal <[email protected]>

* Update quarto/intro.qmd

Co-authored-by: Mahesh Binzer-Panchal <[email protected]>

* apptainer.qmd rough lesson plan

* example.def

* Update apptainer.qmd

* add runscript to example .def file

* lesson notes

* Update apptainer.qmd

* add Mahesh notes

* Update Schedule (#65)

* Add chapter on pixi (#68)

* Add chapter on pixi

* incorporated the other changes suggested by mahesh-panchal

* Update Pixi lesson

* Move gitpod intro

* Organise chapters

* Update Gitpod Intro

* Remove extra space

---------

Co-authored-by: CormacKinsella <[email protected]>
Co-authored-by: Jason Hill <[email protected]>
Co-authored-by: Estelle PW <[email protected]>
Co-authored-by: Guilherme Borges Dias <[email protected]>
Co-authored-by: Miguel Ángel Redondo <[email protected]>
Co-authored-by: Per Unneberg <[email protected]>
Co-authored-by: Martin Pippel <[email protected]>
Co-authored-by: Amrei <[email protected]>
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Lesson: Pixi
3 participants