Draft
Conversation
- Split random_forest.py into classic_rf.py, splitted_rf.py and utils.py - Add controller.py as a subordinate class that handles the execution - classic_rf.py and splitted_rf.py hold the computing logic - utils.py contains the shared code of the both computing classes and everything needed for evaluation
…AM usage; integrated switch on via config.py
* harmonise PREDICT_AND_EVALUATE * Delete all old rf models if new ones are saved
Removed unnecessary comment and fixed print statement formatting.
Removed unused FASTA_DIR constant and retrain flag.
first version for integrating kmers
* Set python version to 3.11, fix preprocessing and add ToDos
- Add "Count_Per_Org" to "Evaluation" for stacked model - Save log to "Evaluation" folder
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.