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Analysing Boolean Networks
Analysing Boolean Networks
 
 
genome_GenBank
genome_GenBank
 
 
results_WT_GRN
results_WT_GRN
 
 
src
src
 
 
target
target
 
 
.DS_Store
.DS_Store
 
 
Attractor_unpivot_TopStrain_GRNBased.csv
Attractor_unpivot_TopStrain_GRNBased.csv
 
 
Attractors_TopStrain_GRNBased.csv
Attractors_TopStrain_GRNBased.csv
 
 
Attractors_wildtype_GRNBased.csv
Attractors_wildtype_GRNBased.csv
 
 
BottomStrain_GRNbased.csv
BottomStrain_GRNbased.csv
 
 
BottomStrain_GRNbased.txt
BottomStrain_GRNbased.txt
 
 
BottomStrain_GoldStandardGRNbased.csv
BottomStrain_GoldStandardGRNbased.csv
 
 
BottomStrain_GoldStandardGRNbased.txt
BottomStrain_GoldStandardGRNbased.txt
 
 
Example_SBOL
Example_SBOL
 
 
Example_SBOL.xml
Example_SBOL.xml
 
 
GRN_GoldStandard_based_model.xml
GRN_GoldStandard_based_model.xml
 
 
GRN_based_model.xml
GRN_based_model.xml
 
 
GRN_inferred_based_model.xml
GRN_inferred_based_model.xml
 
 
GoldstandardGRN.tsv
GoldstandardGRN.tsv
 
 
Infered_GRN_2020Jackson.tsv
Infered_GRN_2020Jackson.tsv
 
 
README.md
README.md
 
 
TopStrain_GRN_based_model.xml
TopStrain_GRN_based_model.xml
 
 
TopStrain_GRNbased.txt
TopStrain_GRNbased.txt
 
 
TopStrain_GoldStandardGRNbased.txt
TopStrain_GoldStandardGRNbased.txt
 
 
dirEvo_BottomPatterns.csv
dirEvo_BottomPatterns.csv
 
 
dirEvo_TopPatterns.csv
dirEvo_TopPatterns.csv
 
 
module_BO_10845_bindsto_BO_3533.xml
module_BO_10845_bindsto_BO_3533.xml
 
 
outpufile.xml
outpufile.xml
 
 
pom.xml
pom.xml
 
 
processed_BottomStrain_GRNbased.txt
processed_BottomStrain_GRNbased.txt
 
 
processed_BottomStrain_GRNbased_Attractors.csv
processed_BottomStrain_GRNbased_Attractors.csv
 
 
processed_TopStrain_GRNbased.txt
processed_TopStrain_GRNbased.txt
 
 
sbolOfGRN_GoldStandard.xml
sbolOfGRN_GoldStandard.xml
 
 
sbolOfGRN_inferred.xml
sbolOfGRN_inferred.xml
 
 
sbolOfYeast_8.xml
sbolOfYeast_8.xml
 
 
tsne.py
tsne.py
 
 
unpivotAttractorsCSV.py
unpivotAttractorsCSV.py
 
 
unpivotNetworksTSV.py
unpivotNetworksTSV.py
 
 
unpivot_TopStrain_GoldstandardGRN.csv
unpivot_TopStrain_GoldstandardGRN.csv
 
 
unpivot_dirEvo_BottomPatterns.csv
unpivot_dirEvo_BottomPatterns.csv
 
 
unpivot_processed_BottomStrain_GRNbased_Attractors.csv
unpivot_processed_BottomStrain_GRNbased_Attractors.csv
 
 
unpivot_wildtype_GRNBased.csv
unpivot_wildtype_GRNBased.csv
 
 
unpivot_wildtype_GoldstandardGRN.tsv
unpivot_wildtype_GoldstandardGRN.tsv
 
 
virtualparts-boolean.iml
virtualparts-boolean.iml
 
 
wildtype_GoldStandarGRNbased.csv
wildtype_GoldStandarGRNbased.csv
 
 
wildtype_GoldStandarGRNbased.txt
wildtype_GoldStandarGRNbased.txt
 
 
yeast_8.3.5.xml
yeast_8.3.5.xml
 
 

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VPR-Boolean

Boolean Virtual Parts Repository

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