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fontikar committed Dec 4, 2024
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1 change: 1 addition & 0 deletions DESCRIPTION
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Expand Up @@ -44,3 +44,4 @@ VignetteBuilder: knitr
Config/testthat/edition: 3
LazyData: true
URL: https://traitecoevo.github.io/hmde/
BugReports: https://github.com/traitecoevo/austraits/issues
3 changes: 1 addition & 2 deletions README.Rmd
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---
title: "hmde: Hierarchical Methods for Differential Equations"
output: github_document
---

![](man/figures/hmde_hex.png){fig-align="right" width=30%}
# hmde <img src="man/figures/hmde_hex.png" align="right" alt="" width="220" />

The goal of `hmde` is to implement hierarchical Bayesian longitudinal models to solve the Bayesian inverse problem of estimating differential equation parameters based on repeat measurement surveys. Estimation is done using Markov Chain Monte Carlo, implemented through
[Stan](https://mc-stan.org/) via [RStan](https://mc-stan.org/users/interfaces/rstan), built under [R](https://cran.r-project.org/) 4.3.3. The inbuilt models are based on case studies in ecology. The hierarchical Bayesian longitudinal method was first introduced in O'Brien et al., [2024](https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.14463).
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5 changes: 1 addition & 4 deletions README.md
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hmde: Hierarchical Methods for Differential Equations
================

<img src="man/figures/hmde_hex.png" style="width:30.0%"
data-fig-align="right" />
# hmde <img src="man/figures/hmde_hex.png" align="right" alt="" width="220" />

The goal of `hmde` is to implement hierarchical Bayesian longitudinal
models to solve the Bayesian inverse problem of estimating differential
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2 changes: 1 addition & 1 deletion _pkgdown.yml
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href: 'articles/canham.html'
github:
icon: fab fa-github fa-lg
href: https://github.com/traitecoevo/austraits/
href: https://github.com/traitecoevo/hmde/



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