Updated deSolve to be suggested instead of forced per Dan's suggestio…

…n. Removed extraneous data from previous instantiation of Canham vignette that was mistakenly added.
traitecoevo · Dec 3, 2024 · 0b3defc · 0b3defc
1 parent 03c5865
commit 0b3defc
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Showing 4 changed files with 3 additions and 5 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -25,8 +25,7 @@ Imports:
     RcppParallel (>= 5.0.1),
     rlang,
     rstan (>= 2.18.1),
-    rstantools (>= 2.3.1.1),
-    deSolve
+    rstantools (>= 2.3.1.1)
 LinkingTo: 
     BH (>= 1.66.0),
     Rcpp (>= 0.12.0),
@@ -42,7 +41,8 @@ Suggests:
     withr,
     mnormt,
     here,
-    patchwork
+    patchwork,
+    deSolve
 VignetteBuilder: knitr
 Config/testthat/edition: 3
 LazyData: true
diff --git a/NAMESPACE b/NAMESPACE
@@ -13,7 +13,6 @@ export(hmde_plot_de_pieces)
 export(hmde_run)
 export(hmde_vb_de)
 import(Rcpp)
-import(deSolve)
 import(dplyr)
 import(ggplot2)
 import(methods)

diff --git a/R/hmde-package.R b/R/hmde-package.R
@@ -13,7 +13,6 @@
 #' @importFrom rstantools rstan_config
 #' @importFrom RcppParallel RcppParallelLibs
 #' @importFrom stats median
-#' @importFrom deSolve ode
 #'
 #' @references
 #' Stan Development Team (NA). RStan: the R interface to Stan. R package version 2.26.23. https://mc-stan.org

diff --git a/inst/extdata/tree_canham_fit.rds b/inst/extdata/tree_canham_fit.rds