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1. pcms pcms Public

   Phylogenetic Covariance Matrix Sparisifcation

   C++

2. ks-perm-test ks-perm-test Public

   A Python C++ extension that implements a permutation test based on finding the maximum two-sample Kolmogorov-Smirnov distance over splits of an ordered sequence.

   C++

3. jlt jlt Public

   A Python C extension that implements the Johnson-Lindenstrauss transform (JLT) and fast Johnson-Lindenstrauss Transform (FJLT).

   C

4. contact-networks contact-networks Public

   Exploration of contact networks, graph subsampling, and SIR epidemic simulation.

   Python