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WIP: update developer instructions #2811

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WIP: update developer instructions #2811

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Commits on Aug 6, 2022

  1. first try at revised index

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Commits on Aug 15, 2022

  1. Merge branch 'latest' into update_doc_structure

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Commits on Aug 16, 2022

  1. lots of details

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  2. much docs, so wow

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  3. even more docs

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  4. even more docs

    @ctb
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  5. mo'

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    ctb committed Aug 16, 2022
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  6. add issue links

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    ctb committed Aug 16, 2022
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  7. fix more links

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    ctb committed Aug 16, 2022
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Commits on Aug 17, 2022

  1. notes

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    ctb committed Aug 17, 2022
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  2. update text

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    ctb committed Aug 17, 2022
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Commits on Aug 18, 2022

  1. Apply suggestions from code review 

    thanks!

Co-authored-by: ccbaumler <[email protected]>
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    ctb and ccbaumler committed Aug 18, 2022
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  2. address many of @ccbaumler suggestions

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    ctb committed Aug 18, 2022
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  3. Update doc/sourmash-internals.md 

    Co-authored-by: ccbaumler <[email protected]>
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    ctb and ccbaumler committed Aug 18, 2022
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  4. misc changes

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Commits on Aug 19, 2022

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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Commits on Aug 20, 2022

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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  2. whups, add faq.md

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Commits on Aug 21, 2022

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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Commits on Aug 22, 2022

  1. Merge branch 'latest' into update_doc_structure

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Commits on Aug 26, 2022

  1. Merge branch 'latest' into update_doc_structure

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Commits on Aug 30, 2022

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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Commits on Aug 31, 2022

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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Commits on Sep 23, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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    ctb committed Sep 23, 2023
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  2. update some text

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Commits on Sep 26, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
    @ctb
    ctb committed Sep 26, 2023
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  2. more FAQ

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    ctb committed Sep 26, 2023
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  3. update / add verify notes

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    ctb committed Sep 26, 2023
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  4. more writing

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  5. more

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Commits on Sep 27, 2023

  1. more

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  2. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
    @ctb
    ctb committed Sep 27, 2023
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  3. fix links etc

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    ctb committed Sep 27, 2023
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  4. add faq

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Commits on Sep 28, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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Commits on Sep 29, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
    @ctb
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  2. add funding acks

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    ctb committed Sep 29, 2023
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Commits on Sep 30, 2023

  1. detailed gather output

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    ctb committed Sep 30, 2023
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  2. minor updates

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    ctb committed Sep 30, 2023
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  3. add information about save formats and memory usage

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  4. add section on choosing a reference for read mapping

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  5. add section on retrieving reads to FAQ

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  6. collection load order

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  7. update author/copyright

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  8. minor corrections

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Commits on Oct 1, 2023

  1. close to done with a first pass

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  2. finish off internals

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  3. finish things off?

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Commits on Oct 3, 2023

  1. clean up missing refs

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    ctb committed Oct 3, 2023
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  2. add publications

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  3. Merge branch 'latest' into update_doc_structure

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Commits on Oct 13, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
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  2. Merge branch 'update_doc_structure' of https://github.com/sourmash-bi… 

    …o/sourmash into update_doc_structure
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  3. update new -> index

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  4. Apply suggestions from code review 

    thanks!

Co-authored-by: ccbaumler <[email protected]>
    @ctb @ccbaumler
    ctb and ccbaumler committed Oct 13, 2023
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Commits on Oct 14, 2023

  1. Merge branch 'update_doc_structure' into update_doc_structure_index

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  2. update

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  3. add global toc

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  4. remove ToC at top

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  5. try unhiding

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  6. add sidebar

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  7. add TOC to sidebar

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  8. upd sidebar

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  9. rename internals page

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  10. clean up

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Commits on Oct 15, 2023

  1. add developer quickstart

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  2. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_structure
    @ctb
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  3. Merge branch 'update_doc_structure' into update_doc_add_dev_and_install

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  4. clean up dev instructions a bit

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  5. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_add_dev_and_install
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Commits on Oct 16, 2023

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o update_doc_add_dev_and_install
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