Wave containers showcase

This repository includes examples showing how to configure Nextflow to run with the Wave container provisioning service.

1. Authenticate private container repositories
2. Build and deliver Nextflow module containers
3. Build and deliver module containers to a private repository
4. Build a container based on Conda packages
5. Augment existing containers with Nextflow process resources
6. Run a pipeline with S3 using Wave and Fusion file system
7. Run nf-core/RNAseq using Conda-based containers and Fusion file system
8. Run a pipeline on a remote Kubernetes cluster using Wave and Fusion file system
9. Run a pipeline with Google Batch using Fusion over Google Storage bucket
10. Run a pipeline with Google Kubernetes Engine using Fusion over Google Storage bucket
11. Bonus: Interactive debugging of remotely executed tasks

For more details check out the Wave user documentation.