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Python tests

Python tests #531

Workflow file for this run

name: Python tests
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
create:
branches: [master]
tags: ['**']
schedule:
- cron: "0 4 * * MON"
jobs:
test:
strategy:
fail-fast: false
matrix:
platform: [ubuntu-latest, macos-latest, windows-latest]
python-version: ["3.11"]
mne-version: [mne-stable]
include:
# Test mne development version only on ubuntu
- platform: ubuntu-latest
python-version: "3.11"
mne-version: mne-main
run-as-extra: true
runs-on: ${{ matrix.platform }}
env:
TZ: Europe/Berlin
FORCE_COLOR: true
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- uses: actions/cache@v3
with:
path: ${{ env.pythonLocation }}
key: ${{ env.pythonLocation }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('requirements-dev.txt') }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install -r requirements-dev.txt
pip install -e .
- name: Install MNE-Python (development version)
if: "matrix.mne-version == 'mne-main'"
run: |
pip install git+https://github.com/mne-tools/mne-python.git@main
- name: Check installed versions
run: |
mne sys_info
- name: Check formatting
if: "matrix.platform == 'ubuntu-latest'"
run: |
flake8 --docstring-convention numpy .
check-manifest .
black . --check
isort . --check
pre-commit run --all-files || ( git status --short ; git diff ; exit 1 )
- name: Test with pytest
run: |
pytest tests/ --cov=pyprep/ --cov-report=xml --cov-config=setup.cfg --verbose -s
- name: Build docs
run: |
make -C docs/ clean
make -C docs/ html
- name: Upload artifacts
if: "matrix.platform == 'ubuntu-latest'"
uses: actions/upload-artifact@v3
with:
name: docs-artifact
path: docs/_build/html
- name: Upload coverage report
uses: codecov/codecov-action@v3
with:
token: ${{ secrets.CODECOV_TOKEN }} # not required but might help API rate limits
files: ./coverage.xml