Update from update/software-2025-10-19

database/github/CRG-CNAG/EOSC-Pilot/metadata.json

@@ -0,0 +1,39 @@
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+    "uid": "github/CRG-CNAG/EOSC-Pilot",
+    "url": "https://github.com/CRG-CNAG/EOSC-Pilot",
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+        "url": "https://github.com/CRG-CNAG/EOSC-Pilot",
+        "full_name": "CRG-CNAG/EOSC-Pilot",
+        "html_url": "https://github.com/CRG-CNAG/EOSC-Pilot",
+        "private": false,
+        "description": "EOSC pilot project",
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+        "updated_at": "2019-03-03T17:34:39Z",
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+            "node_id": "MDc6TGljZW5zZTE0"
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+            "login": "CRG-CNAG",
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+        "timestamp": "2025-10-19 00:54:38.967639",
+        "avatar": "https://avatars.githubusercontent.com/u/16474917?v=4"
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database/github/IOR-Bioinformatics/PCSF/metadata.json

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+    "uid": "github/IOR-Bioinformatics/PCSF",
+    "url": "https://github.com/IOR-Bioinformatics/PCSF",
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+        "url": "https://github.com/IOR-Bioinformatics/PCSF",
+        "full_name": "IOR-Bioinformatics/PCSF",
+        "html_url": "https://github.com/IOR-Bioinformatics/PCSF",
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+        "avatar": "https://avatars.githubusercontent.com/u/20129638?v=4"
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+}

database/github/JaxLayerLumos/JaxLayerLumos/metadata.json

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+    "uid": "github/JaxLayerLumos/JaxLayerLumos",
+    "url": "https://github.com/JaxLayerLumos/JaxLayerLumos",
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+        "full_name": "JaxLayerLumos/JaxLayerLumos",
+        "html_url": "https://github.com/JaxLayerLumos/JaxLayerLumos",
+        "description": "A JAX-based Differentiable Optical and Radio Frequency Simulator for Multilayer Structures",
+        "created_at": "2024-04-02T03:23:07Z",
+        "updated_at": "2025-10-17T06:11:42Z",
+        "clone_url": "https://github.com/JaxLayerLumos/JaxLayerLumos.git",
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+        "timestamp": "2025-10-19 00:54:21.655962",
+        "avatar": "https://avatars.githubusercontent.com/u/173750410?v=4"
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database/github/MALES-project/SpeckleCn2Profiler/metadata.json

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+        "full_name": "MALES-project/SpeckleCn2Profiler",
+        "html_url": "https://github.com/MALES-project/SpeckleCn2Profiler",
+        "description": ":satellite: :cyclone: A platform to use speckle patterns to describe atmospheric turbulence",
+        "created_at": "2024-01-08T09:04:50Z",
+        "updated_at": "2025-10-15T14:11:42Z",
+        "clone_url": "https://github.com/MALES-project/SpeckleCn2Profiler.git",
+        "homepage": "https://males-project.github.io/SpeckleCn2Profiler/",
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+        "license": {
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+            "login": "MALES-project",
+            "type": "Organization"
+        },
+        "topics": [
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+            "image-processing",
+            "machine-learning",
+            "python",
+            "signal-processing",
+            "turbulence"
+        ],
+        "timestamp": "2025-10-19 00:54:22.453766",
+        "avatar": "https://avatars.githubusercontent.com/u/150135203?v=4"
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+}

database/github/MarcelRobeer/explabox/metadata.json

@@ -0,0 +1,50 @@
+{
+    "parser": "github",
+    "uid": "github/MarcelRobeer/explabox",
+    "url": "https://github.com/MarcelRobeer/explabox",
+    "data": {
+        "doi": "https://doi.org/10.5281/zenodo.17256331",
+        "name": "explabox",
+        "url": "https://github.com/MarcelRobeer/explabox",
+        "full_name": "MarcelRobeer/explabox",
+        "html_url": "https://github.com/MarcelRobeer/explabox",
+        "description": "Explore/examine/explain/expose your model with the explabox!",
+        "created_at": "2022-05-10T11:20:18Z",
+        "updated_at": "2025-10-14T11:32:23Z",
+        "clone_url": "https://github.com/MarcelRobeer/explabox.git",
+        "homepage": "https://explabox.readthedocs.io",
+        "size": 3255,
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+        "language": "Python",
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+        "license": {
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+            "name": "GNU Lesser General Public License v3.0",
+            "spdx_id": "LGPL-3.0",
+            "url": "https://api.github.com/licenses/lgpl-3.0",
+            "node_id": "MDc6TGljZW5zZTEy"
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+        "owner": {
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+            "avatar_url": "https://avatars.githubusercontent.com/u/1345476?v=4",
+            "login": "MarcelRobeer",
+            "type": "User"
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+        "topics": [
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+            "python",
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+        "timestamp": "2025-10-19 00:54:23.925837",
+        "avatar": "https://avatars.githubusercontent.com/u/1345476?v=4"
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+}

database/github/Slugger70/VelvetOptimiser/metadata.json

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+{
+    "parser": "github",
+    "uid": "github/Slugger70/VelvetOptimiser",
+    "url": "https://github.com/Slugger70/VelvetOptimiser",
+    "data": {
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+        "url": "https://github.com/Slugger70/VelvetOptimiser",
+        "full_name": "Slugger70/VelvetOptimiser",
+        "html_url": "https://github.com/Slugger70/VelvetOptimiser",
+        "private": false,
+        "description": "Automatically optimise three of Velvet's assembly parameters.",
+        "created_at": "2015-07-28T05:52:32Z",
+        "updated_at": "2015-07-28T05:52:33Z",
+        "clone_url": "https://github.com/Slugger70/VelvetOptimiser.git",
+        "homepage": "http://www.vicbioinformatics.com/",
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+        "language": "Perl",
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+}

database/github/TGAC/brassica/metadata.json

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+{
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+        "full_name": "TGAC/brassica",
+        "html_url": "https://github.com/TGAC/brassica",
+        "description": "Brassica Information Portal",
+        "created_at": "2015-02-05T18:45:10Z",
+        "updated_at": "2020-01-03T03:15:37Z",
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database/github/USDA-ARS-GBRU/itsxpress/metadata.json

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+        "html_url": "https://github.com/USDA-ARS-GBRU/itsxpress",
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+        "description": "Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis",
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+        "updated_at": "2025-03-03T14:54:01Z",
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+        "timestamp": "2025-10-19 00:54:40.191238",
+        "avatar": "https://avatars.githubusercontent.com/u/28271938?v=4"
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+}

database/github/USDA-ARS-GBRU/q2_itsxpress/metadata.json

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+    "uid": "github/USDA-ARS-GBRU/q2_itsxpress",
+    "url": "https://github.com/USDA-ARS-GBRU/q2_itsxpress",
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+        "url": "https://github.com/USDA-ARS-GBRU/q2_itsxpress",
+        "full_name": "USDA-ARS-GBRU/q2_itsxpress",
+        "html_url": "https://github.com/USDA-ARS-GBRU/q2_itsxpress",
+        "private": false,
+        "description": "A plugin for qiime2 that runs ITSxpress",
+        "created_at": "2018-06-21T18:47:13Z",
+        "updated_at": "2024-10-18T06:20:48Z",
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