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@rnabioco

RNA Bioscience Initiative (RBI)

The RNA Bioscience Initiative Informatics Fellows program

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  1. clustifyr clustifyr Public

    Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

    R 113 14

  2. valr valr Public

    Genome Interval Arithmetic in R

    R 89 25

  3. djvdj djvdj Public

    An R package to analyze single-cell V(D)J data

    R 24 4

  4. raer raer Public

    Characterize A-to-I RNA editing in bulk and single-cell RNA sequencing experiments

    R 7 2

  5. ggtrace ggtrace Public

    ggplot2 geoms to outline groups of data points

    R 15 2

  6. rhumba rhumba Public

    Snakemake pipelines for RNA sequencing data

    C 2 2

Repositories

Showing 10 of 74 repositories
  • antigen-exchange Public

    Analysis for antigen exchange paper

    rnabioco/antigen-exchange’s past year of commit activity
    HTML 0 0 0 0 Updated Dec 3, 2024
  • molb-7950 Public

    MOLB 7950: Informatics and Statistics for Molecular Biology

    rnabioco/molb-7950’s past year of commit activity
    HTML 3 0 6 1 Updated Nov 26, 2024
  • aa-tRNA-seq Public

    Public-facing repo for aa-tRNA-seq pre-print

    rnabioco/aa-tRNA-seq’s past year of commit activity
    Python 0 0 0 0 Updated Nov 20, 2024
  • 2a-peptide-search Public

    HMM models of the 2A peptide and DB search results

    rnabioco/2a-peptide-search’s past year of commit activity
    HTML 0 0 2 0 Updated Oct 31, 2024
  • molb-7950-data Public

    Data repository for MOLB 7950

    rnabioco/molb-7950-data’s past year of commit activity
    0 0 0 0 Updated Oct 27, 2024
  • scraps Public

    Single-cell RNA Processing Software

    rnabioco/scraps’s past year of commit activity
    Python 11 MIT 4 4 0 Updated Oct 15, 2024
  • valr Public

    Genome Interval Arithmetic in R

    rnabioco/valr’s past year of commit activity
    R 89 25 0 0 Updated Oct 12, 2024
  • rhumba Public

    Snakemake pipelines for RNA sequencing data

    rnabioco/rhumba’s past year of commit activity
    C 2 2 3 0 Updated Sep 1, 2024
  • raer Public

    Characterize A-to-I RNA editing in bulk and single-cell RNA sequencing experiments

    rnabioco/raer’s past year of commit activity
    R 7 2 2 0 Updated Aug 29, 2024
  • clustifyr Public

    Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets

    rnabioco/clustifyr’s past year of commit activity
    R 113 MIT 14 0 0 Updated Aug 29, 2024

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