tests environment - update to latest Python packages

[cderv]

This PR follows the one about R deps.

• Update uv version
• Update python to 3.13.2
• Update all packages in lock file

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[cderv]

Some package updates are making some test fail 😞

This post follows the investigation

No more width and height on figures

• https://github.com/quarto-dev/quarto-cli/blob/main/tests/docs/smoke-all/crossrefs/float/revealjs/revealjs-jupyter-1.qmd

update made crossref structure change 🤔

width and height are no more set in the intermediate md like here

::: {#cell-fig-plot .cell execution_count=1}

::: {.cell-output .cell-output-display}
![Plot](surus.png){#fig-plot width=789 height=411}
:::
:::

Is this expected ? This creates the difference

In HTML it renders to

<div id="cell-fig-plot" class="cell" data-execution_count="1">
<div class="cell-output cell-output-display">
<div id="fig-plot" class="quarto-float quarto-figure quarto-figure-center anchored">
<figure class="quarto-float quarto-float-fig figure">
<div aria-describedby="fig-plot-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
<img src="surus.png" class="img-fluid figure-img">
</div>
<figcaption class="quarto-float-caption-bottom quarto-float-caption quarto-float-fig" id="fig-plot-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
Figure&nbsp;1: Plot
</figcaption>
</figure>
</div>
</div>
</div>

but in Revealjs, we loose quarto-float because of post process for auto-stretch

<img data-src="surus.png" class="r-stretch quarto-figure-center" id="fig-plot"><p class="caption">
Figure&nbsp;1: Plot
</p>

quarto-cli/src/format/reveal/format-reveal.ts

Lines 1033 to 1039 in 95839d2

	// add stretch class if not already when auto-stretch is set
	if (
	autoStretch === true &&
	!hasStretchClass(imageEl) &&
	// if height is already set, we do nothing
	!imageEl.getAttribute("style")?.match("height:") &&
	!imageEl.hasAttribute("height") &&

Is this expected ?

Probably not looking at the code

quarto-cli/src/resources/jupyter/lang/python/setup.py

Lines 18 to 27 in 95839d2

	# matplotlib defaults / format
	try:
	import matplotlib.pyplot as plt
	plt.rcParams['figure.figsize'] = (fig_width, fig_height)
	plt.rcParams['figure.dpi'] = fig_dpi
	plt.rcParams['savefig.dpi'] = "figure"
	from IPython.display import set_matplotlib_formats
	set_matplotlib_formats(fig_format)
	except Exception:

I notice by the way that the function we use for the format has been deprecated for a few versions, and is now removed

• Remove deprecated since 7.14 set_matplotlib_formats ipython/ipython#14658