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@mario-koddenbrock
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Hi everyone,

This pull request introduces the CellposeSAM model to 3DCellScope. I've been getting really good results with it, especially for nuclei segmentation, and I believe it would be a valuable addition to your great software.

This initial implementation includes:

  • The core CellposeSAM model.
  • Integration into the segmentation workflow.

Known Issue:

I've encountered some dependency issues on Windows that I haven't been able to fully resolve yet. However, I wanted to open this pull request to get the ball rolling and hopefully, with your help, we can work towards a fully compatible version.

I'm excited about the potential of CellposeSAM within 3DCellScope and hope this is a good first step towards its full integration.

I look forward to your feedback

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