2025.07

Deployed on July 15th, 2025

• During EBI-ENA submissions now we automatically rename country to geographic location (country and/or sea) and collection_date to collection date; as the ENA requirements changed.
• Added platform DNBSEQ1 and instruments: DNBSEQ-G400, DNBSEQ-T7, DNBSEQ-G800 for EBI-ENA submissions.
• Other general fixes #3474, #3475.
• SPP: merged and deprecated mg-scripts to qp-knight-lab-processing.
• SPP: Added integration tests via a couple of PRs: #129 & #131.
• SPP: Added new command Human Filter & QC existing Prep to facilitate human-filtering existing preparations.
• SPP: Cleaned and centralized sequencers information to kl-metapool & added MiSeq i100, thank you @AmandaBirmingham.
• SPP: Added a new subsample method to randomly select sequences from paired files when they are larger than expected: 720,000,000.
• SPP: Storing TellReadJob/QC_Analysis_TellReadJob.html in the results folder.