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October 31st, 2017

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@josenavas josenavas released this 31 Oct 16:49
· 1375 commits to master since this release

In this release:

  • Taxonomy information is kept in the BIOM tables after filtering samples.
  • User-friendly command and parameter names.
  • When uploading sample/prep information, the system prefixes with the study id only those samples that have not been prefixed before.
  • A warning for the "Downloads" dropdown has been added to the user is aware that he is going to download a big file.
  • When uploading per-sample FASTQ's now the system provides more information about the missing (or extra) files.
  • The validation process of per-sample FASTQ's now properly checks for the run prefix, rather than exact filename.
  • A button to download the mapping file has been added in the analysis pipeline.
  • In the study list, now the artifacts are grouped by processing command and parameters.
  • RedBiom results now shows the number of unique samples, rather than the number of samples in all artifacts
  • When processing an artifact, it now gets auto-selected when entering in the processing page.
  • A bug preventing the Sample Summary page from loading in some cases has been fixed.
  • The ID's of the jobs validating the output of a previous job have been added to the parent job status message.
  • Fixed a bug that embedded the login page in a div if a query to the system failed.
  • Sample Summary and Sample Information is now under the same menu item
  • A bug in the bulk study deletion that prevented to delete studies without Sample Information has been fixed
  • A log of files uploaded to the sample/prep information pages is shown.
  • Update to use QIIME2 2017.9
  • Update to use deblur 1.0.3
  • Artifact parameters and commands have been normalized to latest command available.