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chore: sync agent tooling and shell/editor theme setup#5

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chore/agent-theme-sync
Feb 26, 2026
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chore: sync agent tooling and shell/editor theme setup#5
posaune0423 merged 6 commits intomainfrom
chore/agent-theme-sync

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@posaune0423 posaune0423 commented Feb 26, 2026

Summary

This PR syncs the new agent command/rule/skill structure under .agents and links it into .claude, .codex, and .cursor.
It migrates fish prompt setup to pure-fish/pure, removes old Kiro hook fragments, and adds the generated pure fish functions.
It adds a local Neovim cursor_dark colorscheme and switches LazyVim defaults to use it, while updating editor and shell config files.
It also updates repository guidance docs (AGENTS.md, CLAUDE.md symlink, and docs/tasks notes).


Note

Medium Risk
Broad repo-wide dotfile and CI workflow changes (shell prompt swap, editor theme defaults, and new formatting/lint gates) could break developer environments or CI if any config/tooling assumptions differ across machines.

Overview
Adds a new .agents/ command/rule/skill hierarchy (with supporting PR/CI helper scripts) and wires it into .claude/, .codex/, and .cursor/ via link files, plus replaces CLAUDE.md content with an AGENTS.md-based pointer.

Updates dotfiles to a unified “Cursor Dark” look-and-feel: switches Fish to the pure-fish/pure prompt (removing old Kiro hook fragments and adding the generated pure functions), introduces a local Neovim cursor_dark colorscheme and makes it the LazyVim default, and updates Ghostty/VS Code theme settings accordingly.

Build hygiene is expanded: Makefile targets are reworked into format/format:fix/lint/lint:fix, the formatter now covers sh/zsh/fish/lua/toml/json, and a unified GitHub Actions CI workflow replaces the standalone stylua check to run make format and make lint (with explicit tool installation).

Written by Cursor Bugbot for commit de9e9dd. This will update automatically on new commits. Configure here.

Summary by CodeRabbit

  • New Features

    • Added cursor dark color scheme to editor and terminal configurations.
    • Integrated Pure prompt into Fish shell with enhanced features (Git status, command duration, system time, Kubernetes context).
  • Documentation

    • Added comprehensive agent guidelines and skill documentation for development workflows.
    • Added lessons learned documentation for configuration best practices.
  • Chores

    • Expanded formatting and linting support for Fish, Lua, TOML, JSON, and shell scripts.
    • Updated shell and editor configurations for consistency.

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coderabbitai bot commented Feb 26, 2026

📝 Walkthrough

Walkthrough

The PR introduces comprehensive agent workflow documentation and skills, replaces Kiro CLI integration with Pure shell prompt framework for Fish, adds a Cursor Dark color scheme for Neovim and other tools, and refactors the formatting/linting build system with modular formatter scripts.

Changes

Cohort / File(s) Summary
Agent Commands & Rules
.agents/commands/*.md, .agents/rules/*.mdc
New agent workflow documentation (bug-fix, check, commit, final-check, refactor, understand, worktree-pr commands) and configuration rules (coderabbit, commit-style, mermaid, proactive-subagent-and-skills).
Agent Skills
.agents/skills/*/SKILL.md, .agents/skills/*/...
New skill guidance for bug-fix, code-review, create-pr (with shell scripts: poll-pr.sh, pr-body-update.sh, triage-pr.sh), final-check, find-skills, mermaid-er-diagram, test-driven-development, update-pr; includes references and pattern documentation.
Agent Symlinks
.claude/commands, .claude/rules, .claude/skills, .codex/commands, .codex/rules, .codex/skills, .cursor/commands, .cursor/rules, .cursor/skills
New configuration symlinks pointing to centralized .agents/ directory for commands, rules, and skills.
Pure Prompt Framework
.config/fish/conf.d/_pure_init.fish, .config/fish/conf.d/pure.fish, .config/fish/functions/_pure_*.fish, .config/fish/functions/fish_prompt.fish, .config/fish/functions/fish_title.fish, .config/fish/functions/fish_mode_prompt.fish
Complete Pure shell prompt implementation with initialization, default configuration, and 40+ helper functions for rendering git, virtualenv, AWS, Kubernetes, system time, and other prompt components; replaces Kiro pre/post hooks.
Fish Configuration Updates
.config/fish/config.fish, .config/fish/fish_plugins, .config/fish/README.md, .config/fish/conf.d/00_fig_pre.fish, .config/fish/conf.d/00_kiro_pre.fish, .config/fish/conf.d/99_fig_post.fish, .config/fish/conf.d/99_kiro_post.fish
Removes Kiro CLI hooks, updates to pure-fish/pure plugin, replaces Starship with Pure prompt, updates color theming to Cursor Dark palette.
Neovim Color Scheme
.config/nvim/colors/cursor_dark.lua, .config/nvim/lua/config/lazy.lua, .config/nvim/lua/plugins/colorschema.lua, .config/nvim/lazy-lock.json, .config/nvim/lazyvim.json
New Cursor Dark color scheme for Neovim with comprehensive highlight definitions; updates LazyVim defaults and plugin configuration from ayu-mirage to cursor_dark.
Editor & Terminal Configuration
.config/ghostty/config, .vscode/settings.json, .config/karabiner/karabiner.json
Adds Ghostty desktop notifications and bell features; updates VS Code theme to Cursor Dark and enables terminal bell accessibility; restructures Karabiner key mappings to per-device simple modifications.
Shell Profile & RC Files
.zprofile, .zshrc, .config/mise/config.toml, .gitignore
Updates Zprofile to use zsh-specific pre/post blocks; adds Kiro CLI hooks to Zshrc; adds stylua, taplo, usage to mise tools; adds .nvimlog to gitignore.
Formatting & Linting Tools
Makefile, scripts/format.sh, scripts/format/fish.sh, scripts/format/lua.sh, scripts/format/toml.sh, scripts/format/json.sh, scripts/format/shell.sh, .github/workflows/stylua.yml
Overhauls build system: consolidates formatting targets (format, format:fix, lint, lint:fix); introduces modular formatter scripts orchestrated by format.sh; updates GitHub Actions workflow to parallel format-and-lint jobs covering fish, lua, json, toml, shell.
Fish Completions & Helper Functions
.config/fish/completions/bun.fish, .config/fish/functions/pure_get_latest_release_version.fish
Minor formatting cleanup of bun completions; adds pure_get_latest_release_version helper to fetch GitHub releases.
Documentation & Tasks
AGENTS.md, CLAUDE.md, docs/tasks/lessons.md, docs/tasks/todo.md, .agents/commands/check-similarity.md
Adds comprehensive agent guidelines, documents lessons learned from previous work, outlines plan for Cursor Dark theme integration and formatter overhaul, and documents similarity-ts workflow for refactoring.

Estimated code review effort

🎯 3 (Moderate) | ⏱️ ~25 minutes

Possibly related PRs

Poem

🐰 A flurry of configs, a prompt so pure,
Dark cursors shine where themes once were,
Fish swim free of Kiro's old hooks,
Formatters dance in parallel books,
And agents now guidebooks in hand—
This bunny approves of your dotfiles' grand stand!

🚥 Pre-merge checks | ✅ 2 | ❌ 1

❌ Failed checks (1 warning)

Check name Status Explanation Resolution
Docstring Coverage ⚠️ Warning Docstring coverage is 0.00% which is insufficient. The required threshold is 80.00%. Write docstrings for the functions missing them to satisfy the coverage threshold.
✅ Passed checks (2 passed)
Check name Status Explanation
Title check ✅ Passed The title clearly summarizes the main change: synchronizing agent tooling and shell/editor theme configuration across the dotfiles.
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.

✏️ Tip: You can configure your own custom pre-merge checks in the settings.

✨ Finishing Touches
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  • 📝 Generate docstrings (commit on current branch)
🧪 Generate unit tests (beta)
  • Create PR with unit tests
  • Post copyable unit tests in a comment
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@posaune0423 posaune0423 self-assigned this Feb 26, 2026
@posaune0423 posaune0423 added the enhancement New feature or request label Feb 26, 2026
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Actionable comments posted: 11

Note

Due to the large number of review comments, Critical, Major severity comments were prioritized as inline comments.

🟡 Minor comments (22)
.config/ghostty/config-25-25 (1)

25-25: ⚠️ Potential issue | 🟡 Minor

Remove leading whitespace for consistency.

Line 25 has a leading space before bell-features, which is inconsistent with the rest of the configuration file where all keys start at column 1. This could potentially cause parsing issues.

Proposed fix
- bell-features = title,attention,system
+bell-features = title,attention,system
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/ghostty/config at line 25, Remove the leading space before the
configuration key by updating the line that defines "bell-features" so the key
starts at column 1 (i.e., change the line " bell-features =
title,attention,system" to have no leading whitespace); ensure the
"bell-features" key is aligned with other top-level keys to maintain consistent
parsing and formatting.
.config/fish/functions/_pure_prompt_beginning.fish-4-6 (1)

4-6: ⚠️ Potential issue | 🟡 Minor

Use echo -n or printf to prevent trailing newline that breaks prompt rendering.

The plain echo command appends a newline, which becomes embedded in the prompt output when _pure_prompt_beginning is invoked as a command substitution in _pure_prompt_new_line.fish. This causes the ANSI clear-line escape sequence (\r\033[K) to be followed by a newline, breaking the intended line-clearing behavior.

Suggested fix
-    set --local clear_line "\r\033[K"
-
-    echo $clear_line
+    echo -n "\r\033[K"

Or using printf (more portable):

-    set --local clear_line "\r\033[K"
-
-    echo $clear_line
+    printf '\r\033[K'
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_beginning.fish around lines 4 - 6, The
function _pure_prompt_beginning currently uses echo $clear_line which appends a
trailing newline and breaks prompt rendering; change the output to avoid the
newline by emitting the clear_line variable with either echo -n $clear_line or
preferably use printf '%s' "$clear_line" so the \r\033[K sequence is written
without a trailing newline (refer to the _pure_prompt_beginning function and the
clear_line variable).
.config/fish/functions/_pure_prompt_aws_profile.fish-15-17 (1)

15-17: ⚠️ Potential issue | 🟡 Minor

Missing quotes around variable in test -n.

Same issue as in _pure_prompt_virtualenv.fish — without quotes, test -n $aws_profile will return true when the variable is empty.

🐛 Proposed fix
-        if test -n $aws_profile
+        if test -n "$aws_profile"
             echo "$pure_symbol_aws_profile_prefix$aws_profile_color$aws_profile"
         end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_aws_profile.fish around lines 15 - 17,
Quote the aws_profile variable in the conditional to avoid false positives when
it's empty: update the if test in the _pure_prompt_aws_profile.fish function to
use test -n "$aws_profile" (and similarly ensure other variable checks like in
_pure_prompt_virtualenv.fish use quoted expansions) so the condition reliably
checks emptiness; keep the rest of the echo logic intact.
.config/fish/functions/_pure_prompt_virtualenv.fish-16-18 (1)

16-18: ⚠️ Potential issue | 🟡 Minor

Missing quotes around variable in test -n will cause incorrect behavior.

On line 16, test -n $virtualenv without quotes means when $virtualenv is empty, test -n receives no argument and returns true (exit code 0). This causes the prompt to always output even when no virtualenv is active.

🐛 Proposed fix
-        if test -n $virtualenv
+        if test -n "$virtualenv"
             echo "$pure_symbol_virtualenv_prefix$virtualenv_color$virtualenv"
         end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_virtualenv.fish around lines 16 - 18,
The condition uses an unquoted variable in test -n which causes it to evaluate
true when $virtualenv is empty; update the if condition that checks virtualenv
(the test -n usage) to quote the variable (e.g., test -n "$virtualenv") so the
block that echoes pure_symbol_virtualenv_prefix, virtualenv_color and virtualenv
only runs when a virtualenv is actually set.
.config/fish/functions/_pure_k8s_namespace.fish-2-6 (1)

2-6: ⚠️ Potential issue | 🟡 Minor

Missing --local scope for namespace variable.

The namespace variable is set without a scope flag, creating a global variable that persists beyond this function call. Use --local to properly scope it.

🐛 Proposed fix
 function _pure_k8s_namespace
-    set namespace (kubectl config view --minify --output 'jsonpath={..namespace}' 2>/dev/null)
+    set --local namespace (kubectl config view --minify --output 'jsonpath={..namespace}' 2>/dev/null)
 
     if test -z "$namespace"
         set namespace default
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_k8s_namespace.fish around lines 2 - 6, The
function creates a global variable named namespace; change both assignments to
use a local-scoped variable by calling set --local namespace when assigning the
kubectl output and when falling back to default. Update the occurrences in
_pure_k8s_namespace.fish where you call set namespace (kubectl ...) and set
namespace default to set --local namespace ... so the variable does not leak
outside the function.
.config/fish/functions/_pure_check_availability.fish-7-7 (1)

7-7: ⚠️ Potential issue | 🟡 Minor

Missing --local scope for FAILURE variable.

set FAILURE 1 without a scope flag creates a global variable, which persists and could cause unintended side effects. Use --local to scope it to this function.

🐛 Proposed fix
-    set FAILURE 1
+    set --local FAILURE 1
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_check_availability.fish at line 7, The FAILURE
variable in _pure_check_availability.fish is being set globally with "set
FAILURE 1"; change this to a local-scoped variable by using the fish local scope
flag so FAILURE is only visible inside the _pure_check_availability.fish
function (update the "set FAILURE" invocation accordingly).
.config/fish/functions/fish_prompt.fish-1-1 (1)

1-1: ⚠️ Potential issue | 🟡 Minor

Minor typo in comment.

"a called to" should be "a call to".

-# a called to `_pure_prompt_new_line` is triggered by an event
+# a call to `_pure_prompt_new_line` is triggered by an event
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/fish_prompt.fish at line 1, Fix the typo in the
comment at the top of fish_prompt.fish: change "a called to
`_pure_prompt_new_line` is triggered by an event" to "a call to
`_pure_prompt_new_line` is triggered by an event" so the comment correctly
references the `_pure_prompt_new_line` function and reads clearly.
.config/fish/functions/_pure_format_time.fish-29-29 (1)

29-29: ⚠️ Potential issue | 🟡 Minor

Potential edge case: durations near threshold may produce empty output.

The -gt (greater than) comparison means that when seconds equals threshold, seconds are not displayed. Combined with the early return at line 13, this creates an edge case:

For threshold=5 and milliseconds=5500 (5.5 seconds):

  • Line 13: 5500 < 5000? No → continue
  • seconds = 5
  • Line 29: 5 > 5? False → seconds not appended
  • Result: empty $time array, empty output

If this is intentional, please disregard. Otherwise, consider using -ge:

🔧 Proposed fix
-        test "$seconds" -gt $threshold; and set --append time (printf "%ss" $seconds)
+        test "$seconds" -ge $threshold; and set --append time (printf "%ss" $seconds)
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_format_time.fish at line 29, The current
comparison in _pure_format_time.fish uses "test \"$seconds\" -gt $threshold"
which skips appending seconds when seconds == threshold and can yield empty
output for values like milliseconds=5500; change the comparison to use "-ge"
(greater than or equal) or otherwise adjust the conditional in the block
handling variable seconds (and consider the early return logic earlier in the
function) so that when seconds equals threshold the seconds unit is appended to
the time array instead of being omitted.
.agents/commands/understand.md-6-6 (1)

6-6: ⚠️ Potential issue | 🟡 Minor

Fix spacing typo in Step 2.

Line 6 has an extra full-width space (コード、 情報) that makes formatting inconsistent.

Proposed change
-2. コンテキストを理解した後、開発者のinstructionに必要なコード、 情報を整理してください。
+2. コンテキストを理解した後、開発者のinstructionに必要なコード、情報を整理してください。
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/understand.md at line 6, In the
.agents/commands/understand.md Step 2 text fix the spacing typo by replacing the
full-width space between "コード、 情報" with a normal (single) space so it reads
"コード、情報"; locate the Step 2 sentence and remove the extra full-width whitespace
character to normalize formatting.
.agents/rules/coderabbit.mdc-7-7 (1)

7-7: ⚠️ Potential issue | 🟡 Minor

Fix typo in CLI help sentence.

Line 7 has comandscommands.

Proposed change
-CodeRabbit is already installed in the terminal. Run it as a way to review your code. Run the command: cr -h for details on comands available.
+CodeRabbit is already installed in the terminal. Run it as a way to review your code. Run the command: cr -h for details on commands available.
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/rules/coderabbit.mdc at line 7, Fix the typo in the CLI help
sentence: replace "comands" with "commands" in the line that reads "Run the
command: cr -h for details on comands available." Update the text that mentions
running coderabbit (e.g., the string containing "cr -h" and "coderabbit
--prompt-only -t uncommitted") so it reads "commands" to correct the spelling.
.agents/rules/proactive-subagent-and-skills.mdc-10-10 (1)

10-10: ⚠️ Potential issue | 🟡 Minor

Typo: http://SKILL.md should be SKILL.md.

The reference appears to have been accidentally formatted as a URL. This should likely be a plain filename reference.

✏️ Proposed fix
-- **Skill**: 専門知識が必要なタスク → 作業開始前に `http://SKILL.md` を読み、手順/制約をそのまま適用する。宣言だけで終わらせない。
+- **Skill**: 専門知識が必要なタスク → 作業開始前に `SKILL.md` を読み、手順/制約をそのまま適用する。宣言だけで終わらせない。
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/rules/proactive-subagent-and-skills.mdc at line 10, Replace the
mistaken URL reference "http://SKILL.md" with the plain filename "SKILL.md" in
the rule line starting with "**Skill**: 専門知識が必要なタスク" so the text reads that the
agent should read SKILL.md (not a URL) before starting work; update only that
token and preserve the surrounding instruction wording and formatting.
.agents/skills/create-pr/scripts/pr-body-update.sh-93-96 (1)

93-96: ⚠️ Potential issue | 🟡 Minor

Verification may produce false negatives due to whitespace normalization.

GitHub may normalize whitespace (e.g., trailing newlines, CRLF) in PR bodies. A byte-for-byte comparison could fail even when the update succeeded semantically.

Consider normalizing both strings before comparison, or accepting minor whitespace differences:

🛠️ Proposed fix
-if [[ "$updated_body" != "$(cat "$body_file")" ]]; then
+# Normalize trailing whitespace for comparison
+expected_body="$(cat "$body_file" | sed 's/[[:space:]]*$//')"
+actual_body="$(echo "$updated_body" | sed 's/[[:space:]]*$//')"
+if [[ "$actual_body" != "$expected_body" ]]; then
   echo "PR body mismatch after update." >&2
   exit 1
 fi
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/scripts/pr-body-update.sh around lines 93 - 96, The
byte-for-byte comparison between updated_body and the contents of body_file can
false-negative due to whitespace/line-ending normalization; modify the
verification in pr-body-update.sh to normalize both sides (e.g., convert CRLF to
LF, strip trailing spaces, and collapse/ensure a single trailing newline) before
comparing, using the existing variables updated_body and body_file so the check
compares canonicalized strings rather than raw bytes.
.agents/skills/find-skills/SKILL.md-60-65 (1)

60-65: ⚠️ Potential issue | 🟡 Minor

Add language identifiers to fenced code blocks.

These blocks currently violate MD040 and will keep markdown lint noisy.

🧹 Suggested fix
-```
+```text
 Install with npx skills add <owner/repo@skill>

 vercel-labs/agent-skills@vercel-react-best-practices
 └ https://skills.sh/vercel-labs/agent-skills/vercel-react-best-practices

- +text
I found a skill that might help! The "vercel-react-best-practices" skill provides
React and Next.js performance optimization guidelines from Vercel Engineering.

To install it:
npx skills add vercel-labs/agent-skills@vercel-react-best-practices

Learn more: https://skills.sh/vercel-labs/agent-skills/vercel-react-best-practices


-```
+```text
I searched for skills related to "xyz" but didn't find any matches.
I can still help you with this task directly! Would you like me to proceed?

If this is something you do often, you could create your own skill:
npx skills init my-xyz-skill
</details>



Also applies to: 77-85, 127-133

<details>
<summary>🤖 Prompt for AI Agents</summary>

Verify each finding against the current code and only fix it if needed.

In @.agents/skills/find-skills/SKILL.md around lines 60 - 65, The MD040 lint
errors are caused by unlabeled fenced code blocks in SKILL.md; update each
triple-backtick block shown (the installation snippet and the two subsequent
example blocks in the diff) to include a language identifier such as text
(change totext) and apply the same fix to the other unlabeled blocks
referenced (lines 77-85 and 127-133) so all fenced code blocks have language
identifiers for proper markdown linting.


</details>

</blockquote></details>
<details>
<summary>.agents/commands/check-simirality.md-11-13 (1)</summary><blockquote>

`11-13`: _⚠️ Potential issue_ | _🟡 Minor_

**Add language tags to fenced blocks.**

These blocks should use `text` (or another explicit language) to satisfy MD040.




Also applies to: 17-19, 67-71

<details>
<summary>🤖 Prompt for AI Agents</summary>

Verify each finding against the current code and only fix it if needed.

In @.agents/commands/check-simirality.md around lines 11 - 13, Update the fenced
code blocks that currently use triple backticks without a language tag (the
blocks shown around the similarity-ts usage and the other occurrences at the
ranges mentioned) to include an explicit language token (e.g., use "text" or
another appropriate language) so they satisfy MD040; locate the three fenced
blocks (around the similarity-ts . example and the other blocks at the other
noted ranges) and change their opening fences from totext (or another
explicit language).


</details>

</blockquote></details>
<details>
<summary>.agents/skills/mermaid-er-diagram/SKILL.md-43-45 (1)</summary><blockquote>

`43-45`: _⚠️ Potential issue_ | _🟡 Minor_

**Specify fence language for the attribute-format snippet.**

The block should declare a language (`text`) to satisfy markdownlint MD040.

<details>
<summary>🧩 Suggested patch</summary>

```diff
-```
+```text
 type column_name [PK|FK|UK] ["comment"]
 ```
```
</details>

<details>
<summary>🤖 Prompt for AI Agents</summary>

Verify each finding against the current code and only fix it if needed.

In @.agents/skills/mermaid-er-diagram/SKILL.md around lines 43 - 45, Update the
fenced code block that contains the attribute format snippet type column_name [PK|FK|UK] ["comment"] to declare a fence language (use "text") so the block
becomes text ... , addressing markdownlint MD040; modify the block in
SKILL.md where that snippet appears (the attribute-format example) to include
the language label.


</details>

</blockquote></details>
<details>
<summary>.agents/commands/bug-fix.md-5-6 (1)</summary><blockquote>

`5-6`: _⚠️ Potential issue_ | _🟡 Minor_

**Fix ambiguous phrasing in the first two steps.**

Line 5 wording (`errorをstackを`) is hard to parse and may confuse execution.

<details>
<summary>✍️ Suggested wording update</summary>

```diff
-1. まず以下のerrorをstackをよく確認し、問題となるfile, codeを直接読み込める場合はコンテキストとして読み込み具体的な原因を特定してください。
-2. どうしても原因特定ができない場合、もし原因特定に必要な情報が不足している場合は、開発者に伝えてください。
+1. まず、エラー内容とスタックトレースを確認し、問題となるファイル・コードを直接読んで具体的な原因を特定してください。
+2. 原因特定に必要な情報が不足している場合は、不足している情報を具体的に開発者へ伝えてください。
```
</details>

<details>
<summary>🤖 Prompt for AI Agents</summary>

```
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/bug-fix.md around lines 5 - 6, Rewrite the ambiguous
Japanese in steps 1 and 2 to be clear and unambiguous: replace the phrase
"errorをstackを" and the existing wording in step 1 with a single clear
instruction like
"まず、エラーのスタックトレースを注意深く確認し、問題の発生したファイルや該当コードが参照できる場合はその箇所を読み込んで具体的な原因を特定してください。",
and update step 2 to a concise fallback such as
"原因が特定できない場合は、原因特定に必要な追加情報が不足している旨を開発者に伝えてください。" Target the text in steps 1 and
2 of .agents/commands/bug-fix.md and ensure grammar and clarity are improved
without changing the intended meaning.
```

</details>

</blockquote></details>
<details>
<summary>.agents/skills/test-driven-development/testing-anti-patterns.md-15-19 (1)</summary><blockquote>

`15-19`: _⚠️ Potential issue_ | _🟡 Minor_

**Add language identifiers to fenced code blocks (MD040).**

Several fences are missing a language tag (for example Line 15-Line 19 and other plain-text pseudo-code blocks), which will keep markdownlint failing.




Also applies to: 56-64, 111-123, 163-185, 225-239, 245-249, 259-265

<details>
<summary>🤖 Prompt for AI Agents</summary>

Verify each finding against the current code and only fix it if needed.

In @.agents/skills/test-driven-development/testing-anti-patterns.md around lines
15 - 19, The fenced code blocks containing plain-text pseudo-code (for example
the block with "1. NEVER test mock behavior\n2. NEVER add test-only methods to
production classes\n3. NEVER mock without understanding dependencies") are
missing language identifiers; add an appropriate language tag (e.g., ```text or

other ranges noted: 56-64, 111-123, 163-185, 225-239, 245-249, 259-265) so
markdownlint MD040 is satisfied and the fences are explicitly tagged.
.agents/rules/mermaid.mdc-36-36 (1)

36-36: ⚠️ Potential issue | 🟡 Minor

Fix malformed Mermaid reference links.

The URLs in Line 36 and Line 39 use mdc:https:/... (single slash), which is likely broken in standard Markdown renderers. Use direct https://... links unless mdc: is intentionally required and validated.

Also applies to: 39-39

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/rules/mermaid.mdc at line 36, Replace the malformed `mdc:https:/...`
reference links with standard `https://...` URLs in the Mermaid rules file:
locate the `**Mermaid Live Editor:**
[https://mermaid.live](mdc:https:/mermaid.live)` occurrence and the similar link
at line 39, and update both link targets to use `https://` (e.g., change
`mdc:https:/mermaid.live` -> `https://mermaid.live`) so Markdown renderers
resolve them correctly.
.agents/skills/create-pr/scripts/poll-pr.sh-23-37 (1)

23-37: ⚠️ Potential issue | 🟡 Minor

Add missing-value guards for options using $2.

--pr, --repo, --interval, and --minutes read $2 without checking argument count, which can fail abruptly under set -u.

#!/usr/bin/env bash
set -euo pipefail
rg -n '^\s*--(pr|repo|interval|minutes)\)' .agents/skills/create-pr/scripts/poll-pr.sh -A4
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/scripts/poll-pr.sh around lines 23 - 37, Guard each
case that reads "$2" (--pr, --repo, --interval, --minutes) by verifying a second
positional argument exists before assigning and shifting; for example, test that
$# -ge 2 or that "${2-}" is non-empty and emit a clear error and exit if the
value is missing, then proceed to set the variable (pr, repo, interval, minutes)
and shift 2. Ensure the checks are placed inside the same case arms that
reference "$2" so you don't attempt to read an unset parameter under set -u.
.agents/skills/create-pr/scripts/triage-pr.sh-17-24 (1)

17-24: ⚠️ Potential issue | 🟡 Minor

Guard option values before reading $2.

At lines 17-24, passing --pr or --repo without a value will crash under set -u (enabled on line 2) with an unbound variable error instead of a controlled usage error.

💡 Proposed fix
     --pr)
+      [[ $# -ge 2 ]] || { echo "--pr requires a value" >&2; usage >&2; exit 1; }
       pr="$2"
       shift 2
       ;;
     --repo)
+      [[ $# -ge 2 ]] || { echo "--repo requires a value" >&2; usage >&2; exit 1; }
       repo="$2"
       shift 2
       ;;
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/scripts/triage-pr.sh around lines 17 - 24, Guard
access to the next positional parameter before assigning pr or repo: in the
triage-pr.sh case arms handling --pr and --repo (the option parsing block using
--pr) check that "$2" is present and is not another option (e.g., not
empty/unset under set -u and not starting with '-') and if the check fails print
the usage/error and exit; otherwise assign pr="$2" (or repo="$2") and shift 2.
Ensure the guard uses a safe expansion (like checking "${2-}" or testing for
emptiness/leading '-' ) so the script no longer triggers an unbound variable
error under set -u.
.agents/commands/commit.md-5-6 (1)

5-6: ⚠️ Potential issue | 🟡 Minor

Clarify the "except this file" reference.

The ignore rule mentions .cursor/** except "this file," but this document is located at .agents/commands/commit.md, not within .cursor/. This may be a copy-paste error or outdated reference that could confuse agents following this workflow.

Consider clarifying what file should be excepted, or if the exception is no longer relevant given the new .agents/ structure.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/commit.md around lines 5 - 6, The note in
.agents/commands/commit.md references ignoring ".cursor/** (except this file)"
which is misleading because this document lives in .agents/, not .cursor/;
update the line that mentions ".cursor/** (except this file)" to either remove
the exception or explicitly name the intended exception file (e.g.,
".cursor/KEEP_ME" or the actual filename to be preserved), and ensure the
instruction mentions .gitignore adherence and the new .agents/ layout so readers
understand whether any .cursor files should be preserved or if the exception is
obsolete.
.agents/rules/commit-style.mdc-51-54 (1)

51-54: ⚠️ Potential issue | 🟡 Minor

Newline escape won't work as shown in bash.

The command template uses \n within double quotes, which bash interprets literally as backslash-n, not as a newline. To produce actual newlines in commit messages:

Option 1: Use $'...' quoting:

git commit -m "emoji type(scope): summary" -m $'- detail1\n- detail2'

Option 2: Use multiple -m flags (cleaner):

git commit -m "emoji type(scope): summary" -m "- detail1" -m "- detail2"
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/rules/commit-style.mdc around lines 51 - 54, The commit template
uses literal "\n" inside a double-quoted second -m which will not create
newlines; update the git commit invocation that currently uses -m "${emoji}
${type}(${scope}): ${summary}" -m "- ${detail1}\n- ${detail2}" so the message
body produces real newlines—either switch the second message argument to ANSI-C
quoting (use $'...' style for the second -m) or supply each bullet as its own -m
flag (e.g., separate -m "- ${detail1}" and -m "- ${detail2}"), leaving the
summary arg intact.
🧹 Nitpick comments (25)
.config/fish/fish_plugins (1)

1-1: Plugin migration to pure-fish/pure looks correct.

The switch to pure-fish/pure aligns with the PR objectives. A few notes on the removed plugins:

  • fisher self-management: Consider adding jorgebucaran/fisher to enable fisher to self-update via fisher update. Without it, you'll need to reinstall fisher manually to update it.
  • Removed functionality: The removal of jethrokuan/z (directory jumping) and PatrickF1/fzf.fish (fuzzy finder) means those features will no longer be available. If these were intentional removals, this is fine; otherwise, you may want to retain them.
💡 Optional: Add fisher for self-management
+jorgebucaran/fisher
 pure-fish/pure

If you still want z and fzf integration:

+jorgebucaran/fisher
+jethrokuan/z
+PatrickF1/fzf.fish
 pure-fish/pure

Based on learnings: "Configure Fish plugins via fish_plugins file using the fisher plugin manager".

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/fish_plugins at line 1, The change replaces the previous
plugins with pure-fish/pure but removed fisher self-management and utilities;
update the fish_plugins file to re-add jorgebucaran/fisher if you want fisher to
self-update (so fisher can run `fisher update`), and optionally re-add
jethrokuan/z and PatrickF1/fzf.fish if you still need directory jumping and fzf
integration; locate the entry that now contains "pure-fish/pure" and insert the
additional plugin identifiers ("jorgebucaran/fisher", "jethrokuan/z",
"PatrickF1/fzf.fish") as separate lines in the same fish_plugins list according
to the fisher format.
.config/fish/functions/_pure_set_default.fish (1)

8-8: Inconsistent variable quoting.

$is_available_universally is quoted but $is_available_globally is not. While this works since values are only ever "0" or "1", consistent quoting improves defensiveness.

Since this appears to be migrated from the upstream pure-fish/pure project, you may prefer to keep it aligned with upstream.

🔧 Suggested fix for consistency
-    if test "$is_available_universally" -eq 0 -a $is_available_globally -eq 0
+    if test "$is_available_universally" -eq 0 -a "$is_available_globally" -eq 0
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_set_default.fish at line 8, In the
_pure_set_default.fish function the if test uses inconsistent variable quoting —
"$is_available_universally" is quoted but $is_available_globally is not; update
the condition to consistently quote the variable references (e.g., use
"$is_available_universally" and "$is_available_globally" in the same test
expression) so the conditional is defensive and aligned with upstream.
.config/fish/functions/_pure_check_for_new_release.fish (1)

20-23: Add timeout and basic error handling to the curl call.

The curl request has no timeout, so it can hang indefinitely on network issues. Additionally, if the GitHub API returns an error (rate limiting, 404), the function silently returns nothing.

♻️ Proposed improvement
     curl \
         --silent \
+        --connect-timeout 5 \
+        --max-time 10 \
         "https://api.github.com/repos/$user_repo/releases/latest" \
         | string match --regex '"tag_name": "\K.*?(?=")'
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_check_for_new_release.fish around lines 20 -
23, The curl call in _pure_check_for_new_release.fish should include a timeout
and basic error handling: update the curl invocation (the command that calls
"https://api.github.com/repos/$user_repo/releases/latest") to add options like
--max-time (e.g. 10) and --fail/--show-error, capture its output into a
variable, test whether curl succeeded and that the response is non-empty, and
only then pipe that variable to string match --regex '"tag_name": "\K.*?(?=")';
if curl fails or the response is empty/contains an API error, print a short
error message to stderr and return a non-zero status instead of silently
returning nothing.
.config/fish/functions/_pure_parse_directory.fish (1)

9-11: Minor typo in comment: "formating" → "formatting".

📝 Fix typo
-            # If path exceeds maximum symbol limit, force fish path formating function to use 1 character
+            # If path exceeds maximum symbol limit, force fish path formatting function to use 1 character
             set folder (fish_prompt_pwd_dir_length=1 prompt_pwd)
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_parse_directory.fish around lines 9 - 11, The
comment above the block that sets folder using fish_prompt_pwd_dir_length and
prompt_pwd has a typo: change "formating" to "formatting" in the comment that
reads "If path exceeds maximum symbol limit, force fish path formating function
to use 1 character" so it instead reads "formatting"; locate the comment near
the set folder (fish_prompt_pwd_dir_length=1 prompt_pwd) line in the
_pure_parse_directory.fish function and update the single-word misspelling only.
.config/fish/functions/_pure_user_at_host.fish (1)

1-13: Reliance on Fish's built-in $hostname is implicit and inconsistent with $username.

The function explicitly retrieves $username via id -u -n on line 2, but $hostname on line 12 relies on Fish's built-in variable without any comment or explicit assignment. While this works, it creates an inconsistency that may confuse future readers.

Consider adding a comment or explicitly setting $hostname for consistency:

✨ Suggested improvement for consistency
 function _pure_user_at_host
     set --local username (id -u -n) # current user name
+    set --local host $hostname      # Fish built-in variable
     set --local at_sign "@"
     set --local at_sign_color (_pure_set_color $pure_color_at_sign)
     set --local hostname_color (_pure_set_color $pure_color_hostname)
 
     set --local username_color (_pure_set_color $pure_color_username_normal) # default color
     if test "$username" = root
         set username_color (_pure_set_color $pure_color_username_root) # different color for root
     end
 
-    echo "$username_color$username$at_sign_color$at_sign$hostname_color$hostname"
+    echo "$username_color$username$at_sign_color$at_sign$hostname_color$host"
 end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_user_at_host.fish around lines 1 - 13, In
_pure_user_at_host, the code retrieves username explicitly but uses Fish's
built-in $hostname implicitly; make this consistent by explicitly setting a
local hostname variable (e.g., using the hostname command) with set --local
hostname (...) near the top of the function (or add a clear comment above the
echo explaining intentional reliance on the built-in), so that
_pure_user_at_host always defines its hostname locally and avoids implicit
globals.
.config/fish/conf.d/_pure_init.fish (2)

1-10: Consider adding a numeric prefix to control load order.

Similar to pure.fish, this file lacks a numeric prefix. Given it initializes state and registers event handlers that other Pure components depend on, explicit load ordering via a numeric prefix (e.g., 00_pure_init.fish) would be clearer.

As per coding guidelines: "Create new Fish configuration files as .fish files in .config/fish/conf.d/ with numeric prefix for controlling load order"

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/conf.d/_pure_init.fish around lines 1 - 10, Rename this conf.d
script to include a numeric prefix to control load order (for example rename to
00_pure_init.fish) so it runs before other Pure components that depend on the
state it sets; ensure the file still registers the `_pure_prompt_new_line`
handler and exports `VIRTUAL_ENV_DISABLE_PROMPT` and `_pure_fresh_session`
unchanged, and verify any packaging/install scripts or documentation that
reference the old filename are updated to the new prefixed name.

51-52: Backup file extension may cause confusion.

The backup creates fish_prompt.pure-backup.fish which is still a .fish file and could potentially be sourced by Fish if it matches any glob patterns. Consider using a non-.fish extension like .pure-backup or .bak to prevent accidental sourcing.

🔧 Suggested alternative backup naming
     # backup fish_prompt and fish_title to default
-    cp $__fish_config_dir/functions/fish_prompt{,.pure-backup}.fish
-    cp $__fish_config_dir/functions/fish_title{,.pure-backup}.fish
+    cp $__fish_config_dir/functions/fish_prompt.fish $__fish_config_dir/functions/fish_prompt.fish.pure-backup
+    cp $__fish_config_dir/functions/fish_title.fish $__fish_config_dir/functions/fish_title.fish.pure-backup
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/conf.d/_pure_init.fish around lines 51 - 52, The backup
commands create files ending with .fish (cp
$__fish_config_dir/functions/fish_prompt{,.pure-backup}.fish and cp
$__fish_config_dir/functions/fish_title{,.pure-backup}.fish), which can be
accidentally sourced; update those cp invocations to use a non-.fish backup
extension (for example .pure-backup or .bak without the trailing .fish) so the
backups are not valid Fish scripts and cannot be sourced by glob patterns.
.config/fish/functions/_pure_get_prompt_symbol.fish (1)

1-12: Unused exit_code argument declared.

The function declares exit_code as an argument (line 3) but never references it in the function body. Either remove the unused argument or document why it's accepted (e.g., for API consistency with other prompt functions).

🔧 Proposed fix to remove unused argument
 function _pure_get_prompt_symbol \
-    --description 'Print prompt symbol' \
-    --argument-names exit_code
+    --description 'Print prompt symbol'
 
     set --local prompt_symbol $pure_symbol_prompt
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_get_prompt_symbol.fish around lines 1 - 12, The
function _pure_get_prompt_symbol declares an unused argument exit_code; remove
exit_code from the function's argument list to avoid misleading API surface, or
if it's kept for consistency, add a short comment inside _pure_get_prompt_symbol
documenting that exit_code is intentionally unused for API compatibility with
other prompt functions; update the function signature accordingly and ensure no
other callers rely on passing that parameter.
.config/fish/conf.d/pure.fish (1)

1-1: Consider adding a numeric prefix for load order control.

Per coding guidelines, conf.d files should have a numeric prefix for controlling load order. This file is named pure.fish without a prefix. Since _pure_init.fish explicitly sources this file, the current setup may work, but a numeric prefix (e.g., 00_pure.fish) would make the intended load order explicit and self-documenting.

As per coding guidelines: "Create new Fish configuration files as .fish files in .config/fish/conf.d/ with numeric prefix for controlling load order"

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/conf.d/pure.fish at line 1, Rename the conf.d file to include a
numeric prefix (for example change pure.fish to 00_pure.fish) so load order is
explicit; update any explicit references in the `_pure_init.fish` initializer
that currently sources `pure.fish` to the new filename (or use a glob that
matches the prefixed name) and keep the existing `set --global pure_version
4.15.1-docs-fossdem-review` line unchanged; ensure sourcing still succeeds and
tests/startup confirm the variable is still set at shell initialization.
.config/fish/functions/_pure_prompt_k8s.fish (1)

5-9: Redundant _pure_k8s_context calls and potentially ineffective check.

  1. _pure_k8s_context is called twice: once on line 5 to check if non-empty, and again on line 7 to capture the value. This is inefficient and introduces a potential race if the context changes between calls.

  2. The check on line 9 (test -n "$context") will always pass if _pure_set_color outputs anything, since $context includes color escape codes concatenated with the actual context value.

♻️ Proposed fix to consolidate context retrieval
 function _pure_prompt_k8s
     if set --query pure_enable_k8s;
         and test "$pure_enable_k8s" = true;
         and _pure_check_availability pure_enable_k8s kubectl
-        and test -n (_pure_k8s_context) # todo: use $(cmd) syntax when Fish 3.3.1 is dropped
 
-        set --local context (_pure_set_color $pure_color_k8s_context)(_pure_k8s_context)
+        set --local k8s_context (_pure_k8s_context)
+        if test -n "$k8s_context"
+            set --local context (_pure_set_color $pure_color_k8s_context)$k8s_context
 
-        if test -n "$context"
             set --local symbol (_pure_set_color $pure_color_k8s_prefix)$pure_symbol_k8s_prefix
             set --local namespace (_pure_set_color $pure_color_k8s_namespace)(_pure_k8s_namespace)
 
             echo "$symbol $context/$namespace"
         end
     end
 end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_k8s.fish around lines 5 - 9, Call
_pure_k8s_context only once and check the raw value before adding color: capture
the plain context into a local variable (e.g., raw_context) by calling
_pure_k8s_context once, test -n "$raw_context" to decide whether to proceed, and
only then set the colored context (e.g., set --local context (_pure_set_color
$pure_color_k8s_context)$raw_context) so you avoid double invocation and the
boolean check being influenced by color escape codes.
.config/fish/functions/_pure_prompt_first_line.fish (1)

1-1: Unused global variable pollutes namespace.

FAILURE is declared at file scope but never used within this function. This variable is set every time the file is sourced, which adds unnecessary global state. Consider removing it, or if it's needed elsewhere, define it in a shared configuration file.

🧹 Proposed fix
-set --global FAILURE 1
-
 function _pure_prompt_first_line \
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_first_line.fish at line 1, The global
variable FAILURE is declared but never used; remove the line that sets it (the
set --global FAILURE 1 statement) from _pure_prompt_first_line.fish to avoid
polluting the global namespace, or if this variable is genuinely required
elsewhere, move its declaration into a shared configuration file and reference
it there instead of defining it in this function.
.config/fish/functions/_pure_prompt_current_folder.fish (1)

1-5: Use a literal return value or local constant instead of file-scoped global.

FAILURE is set at file scope without an explicit scope modifier (defaults to global in Fish at top level). While it's used in this function, setting a global constant each time the file is sourced is unnecessary. Consider using the literal value directly or defining it as a local within the function.

🧹 Proposed fix
-set FAILURE 1
-
 function _pure_prompt_current_folder --argument-names current_prompt_width

-    if test -z "$current_prompt_width"; return $FAILURE; end
+    if test -z "$current_prompt_width"; return 1; end

     set --local current_folder (_pure_parse_directory (math $COLUMNS - $current_prompt_width - 1))
     set --local current_folder_color (_pure_set_color $pure_color_current_directory)

     echo "$current_folder_color$current_folder"
 end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_current_folder.fish around lines 1 - 5,
The file defines a file-scoped global variable FAILURE and the function
_pure_prompt_current_folder uses it for return; remove the top-level "set
FAILURE 1" and change the function to either return the literal value (return 1)
when current_prompt_width is empty or declare a local constant inside the
function (e.g., set -l FAILURE 1) and use that; update references to FAILURE
only within _pure_prompt_current_folder so no global variables are created.
.config/fish/functions/_pure_prompt_command_duration.fish (1)

1-11: Consider returning early when no duration to display.

When CMD_DURATION is unset or below threshold, the function echoes a color escape sequence with no content. While not harmful, it's cleaner to return early to avoid injecting empty escape sequences into the prompt.

🧹 Proposed fix
 function _pure_prompt_command_duration
     set --local command_duration

     # Get command execution duration
     if test -n "$CMD_DURATION"
         set command_duration (_pure_format_time $CMD_DURATION $pure_threshold_command_duration $pure_show_subsecond_command_duration)
     end
+
+    if test -z "$command_duration"
+        return
+    end
+
     set --local command_duration_color (_pure_set_color $pure_color_command_duration)

     echo "$command_duration_color$command_duration"
 end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_command_duration.fish around lines 1 -
11, In _pure_prompt_command_duration, avoid emitting an empty color escape when
there's no duration: check if CMD_DURATION is unset/empty (or after calling
_pure_format_time if you prefer) and return immediately with no output; only
call _pure_set_color and echo the color+duration when command_duration is
non-empty. Reference symbols: function _pure_prompt_command_duration, variable
CMD_DURATION, _pure_format_time, pure_threshold_command_duration,
pure_show_subsecond_command_duration, _pure_set_color, and
pure_color_command_duration.
.config/fish/functions/_pure_prompt_symbol.fish (1)

14-19: This dual-symbol effect is intentional design from the upstream pure-fish/pure project.

When pure_separate_prompt_on_error is true and the command failed, the prompt symbol appears twice: first in error color (embedded in symbol_color at line 15), then again in success color (appended at line 19). This creates a visual separation between error and success states.

The variable naming could be improved for clarity—consider adding a comment at line 15 to document this behavior, since symbol_color actually contains both ANSI color codes and the prompt symbol, which may confuse future readers.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_symbol.fish around lines 14 - 19, The
logic in the prompt rendering (check the pure_separate_prompt_on_error
conditional and the variables symbol_color and prompt_symbol) intentionally
produces a dual-symbol effect by embedding the error-colored symbol into
symbol_color and then echoing symbol_color plus prompt_symbol; add a concise
inline comment near the pure_separate_prompt_on_error branch (adjacent to where
symbol_color is set) explaining that symbol_color intentionally includes the
prompt symbol in error color and that the final echo appends the symbol in the
success color to create the visual separation, and optionally rename or document
symbol_color to indicate it contains both ANSI color codes and the embedded
symbol for future maintainers.
.config/fish/functions/_pure_format_time.fish (1)

1-2: Global variables SUCCESS and FAILURE should be scoped.

These variables are set at file scope without a scope flag, creating global variables that pollute the namespace. Consider using set -g explicitly if intentional, or define them as local constants within the function.

🔧 Option 1: Make explicitly global (if shared across functions)
-set SUCCESS 0
-set FAILURE 1
+set -g SUCCESS 0
+set -g FAILURE 1
🔧 Option 2: Move inside function as local constants
-set SUCCESS 0
-set FAILURE 1
-
 function _pure_format_time \
     --description="Format milliseconds to a human readable format" \
     --argument-names \
         milliseconds \
         threshold \
         show_subsecond

+    set --local SUCCESS 0
+    set --local FAILURE 1
     set --query show_subsecond[1]; or set show_subsecond false
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_format_time.fish around lines 1 - 2, The
top-level assignments to SUCCESS and FAILURE create unintended global variables;
update the definitions in _pure_format_time.fish by either making them explicit
globals with set -g SUCCESS 0 and set -g FAILURE 1 if they must be shared, or
(preferred) remove the file-scope sets and define them as local constants inside
the function that uses them (e.g., use set -l SUCCESS 0 and set -l FAILURE 1 at
the start of the function that references SUCCESS/FAILURE) so the namespace is
not polluted.
.config/fish/functions/_pure_prompt_git.fish (1)

4-4: Variable ABORT_FEATURE should be locally scoped.

This set command without a scope flag creates/overwrites a global variable. Since ABORT_FEATURE is only used within this function, it should be declared with --local.

🔧 Proposed fix
-    set ABORT_FEATURE 2
+    set --local ABORT_FEATURE 2
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_git.fish at line 4, The variable
ABORT_FEATURE is being created as a global due to a plain set command in the
_pure_prompt_git.fish function; change the set invocation that defines
ABORT_FEATURE to use a local scope (e.g., add the --local flag) so the variable
is only visible inside the _pure_prompt_git.fish function and does not overwrite
a global variable.
.config/mise/config.toml (1)

104-107: Consider moving usage to a more appropriate section.

The usage tool (a CLI builder tool) is placed under the # [Bun / Deno] comment section, which is misleading. Consider moving it to a more relevant section like # [CLI Tools - Development] or # [CLI Tools - Other] for better organization.

📁 Suggested reorganization
 # [Bun / Deno]
 bun = "latest"
 deno = "latest"
-usage = "latest"

Add under # [CLI Tools - Development] (around line 46-53):

 # [CLI Tools - Development]
 neovim = "latest"          # modern vim
 tmux = "latest"            # terminal multiplexer
 zellij = "latest"          # tmux alternative
 just = "latest"            # command runner
 watchexec = "latest"      # file watcher
 dotenvx = "latest"         # .env file runner
+usage = "latest"           # CLI builder tool
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/mise/config.toml around lines 104 - 107, The `usage` entry is
misplaced under the `# [Bun / Deno]` section alongside `bun` and `deno`; move
the `usage = "latest"` line into a more appropriate CLI tools section (for
example under a `# [CLI Tools - Development]` or `# [CLI Tools - Other]` header)
so it's grouped with other CLI tools, leaving `bun = "latest"` and `deno =
"latest"` in the Bun/Deno block; update the surrounding comments to reflect the
new grouping and ensure there are no duplicate `usage` entries elsewhere.
.zprofile (1)

71-72: Use path_append for consistency with the rest of this file.

Line 72 uses raw export PATH="$PATH:...", which is inconsistent with the path_append helper used on lines 29 and 40 for PATH management elsewhere in this file. Using the helper function also prevents duplicates when the file is re-sourced.

Proposed change
-# Added by Obsidian
-export PATH="$PATH:/Applications/Obsidian.app/Contents/MacOS"
+# Added by Obsidian
+path_append "/Applications/Obsidian.app/Contents/MacOS"
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.zprofile around lines 71 - 72, Replace the raw export
PATH="$PATH:/Applications/Obsidian.app/Contents/MacOS" with the existing helper
to keep consistency and avoid duplicates: locate the current export line and
call the path_append helper (same helper used on lines where path_append is
defined/used) to add /Applications/Obsidian.app/Contents/MacOS to PATH instead
of directly exporting; ensure you pass the full directory string to path_append
so re-sourcing won't create duplicate entries.
.vscode/settings.json (1)

70-73: Intentional change? Terminal bell sound is now enabled.

The accessibility.signals.terminalBell.sound changed from "off" to "on". Confirm this is intentional, as audible terminal bells can be disruptive in some environments.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.vscode/settings.json around lines 70 - 73, The terminal bell setting was
changed to enable sound; confirm whether the change to
accessibility.signals.terminalBell.sound from "off" to "on" is intentional and,
if not, revert it to "off"; if intentional, add a brief comment or commit
message documenting the rationale and any environment considerations (e.g., CI,
shared workstations) so reviewers know the audible bell was deliberate.
.agents/skills/create-pr/scripts/pr-body-update.sh (1)

81-85: GraphQL mutation error not captured.

If the GraphQL mutation fails (e.g., insufficient permissions, network error), the script redirects output to /dev/null but doesn't check the exit status before proceeding. With set -e, a non-zero exit would terminate, but a 200 response with GraphQL errors in the body would pass silently.

Consider checking for GraphQL errors in the response:

🛠️ Proposed fix
-gh api graphql \
+response=$(gh api graphql \
   -f query='mutation($id:ID!,$body:String!){updatePullRequest(input:{pullRequestId:$id, body:$body}){pullRequest{id}}}' \
   -f id="$pr_id" \
-  -f body="$(cat "$body_file")" \
-  >/dev/null
+  -f body="$(cat "$body_file")")
+
+if echo "$response" | jq -e '.errors' >/dev/null 2>&1; then
+  echo "GraphQL mutation failed: $(echo "$response" | jq -r '.errors[0].message')" >&2
+  exit 1
+fi
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/scripts/pr-body-update.sh around lines 81 - 85, The
GraphQL mutation call using gh api graphql in pr-body-update.sh currently
discards the response (>/dev/null) and won't detect GraphQL errors returned with
HTTP 200; change it to capture the command output into a variable, check the gh
exit status and then parse the JSON response for an "errors" field (or non-empty
.data.updatePullRequest) after running gh api graphql -f query=... -f
id="$pr_id" -f body="$(cat "$body_file")"; if gh fails or the response contains
errors, log the error details and exit non‑zero so failures are visible (use the
same pr_id and body_file variables and the existing mutation string when
locating the call to updatePullRequest).
.agents/commands/refactor.md (1)

75-83: Split the implementation cycle into a proper numbered list.

The current inline formatting at Line 75-Line 83 mixes step labels and body text, which makes the procedure easy to misread. Converting to explicit numbered subsections will improve execution reliability.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/refactor.md around lines 75 - 83, The procedure block
starting with "重複グループ = 1 サイクル" mixes labels and bodies on the same lines;
refactor it into a proper numbered list with explicit subsections 1. 探索, 2.
設計(明文化), 3. 編集(最小差分), 4. 検証(即時), 5. サマリ, placing each step label on its own line
followed by its full explanatory lines (including the serena search
instructions, design items like 抽出先モジュール/関数名 and 移行シム, the editing guidance
about co-location, and the verification command bun run typecheck && bun run
lint && bun run test --coverage) so the flow is clearly separated and easy to
read.
.config/nvim/colors/cursor_dark.lua (2)

78-78: Consider using palette variable for consistency.

Line 78 uses hardcoded #ebc88d while the palette defines c.yellow = "#ebcb8b" (slightly different). This appears intentional for "Number" highlights but differs from Line 111 which uses the same hardcoded value for @number.

If these should match, consider adding a dedicated number entry to the palette for consistency and easier maintenance.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/nvim/colors/cursor_dark.lua at line 78, The "Number" highlight uses
a hardcoded color "#ebc88d" (hl("Number", ...)) which differs from
palette.c.yellow ("#ebcb8b") and the hardcoded value used for "@number"; add a
dedicated palette entry (e.g., c.number = "#ebc88d" or align it with c.yellow)
and update the hl("Number", { fg = ... }) and any "@number" usage to reference
that palette entry instead of hardcoding the hex value to ensure consistency and
easier maintenance.

136-151: Terminal colors include values not defined in palette.

Several terminal colors use hardcoded hex values (#81a1c1, #88c0d0, #ffffff, #505050) that aren't part of the c palette table. While functional, adding these to the palette would improve maintainability if the theme needs adjustment later.

🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/nvim/colors/cursor_dark.lua around lines 136 - 151, Terminal
terminal_color entries use hardcoded hex strings instead of the shared palette
table `c`; add palette entries (e.g., add keys like c.sky_blue = "#81a1c1",
c.cyan = "#88c0d0", c.white = "#ffffff", c.gray_dark = "#505050" or other
descriptive names) to the `c` table and replace usages of
vim.g.terminal_color_4, _6, _7, _8, _12, _14, _15 assignments to reference those
new `c` keys (keep other mappings like vim.g.terminal_color_1/2/3/5/9/10/11/13
pointing to existing c.red/c.green/etc.). Ensure the new palette names are
consistently used anywhere else the same hex values appear.
.agents/commands/commit.md (2)

26-26: Remove redundant -- separator.

The command git add -A -- -- ${file1} has a double -- separator. While harmless, standard usage is a single -- to separate options from pathspecs.

Suggested fix
-     - git add -A -- -- ${file1} ${file2} ${fileN}
+     - git add -A -- ${file1} ${file2} ${fileN}
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/commit.md at line 26, The git add command string contains a
redundant double "--" separator ("git add -A -- -- ${file1} ${file2} ${fileN}");
update the command to use a single separator by replacing the double "--" with a
single "--" so it becomes "git add -A -- ${file1} ${file2} ${fileN}" wherever
that command appears.

38-40: Example also contains double -- separator.

The example mirrors the redundant double -- from the command template.

Suggested fix
-git add -A -- -- routes/admin.php app/Http/Controllers/Admin/UserController.php
+git add -A -- routes/admin.php app/Http/Controllers/Admin/UserController.php
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/commands/commit.md around lines 38 - 40, The example contains a
redundant double "--" in the git add command ("git add -A -- -- routes/admin.php
..."); update that line to use a single separator ("git add -A --
routes/admin.php app/Http/Controllers/Admin/UserController.php") and scan the
surrounding template for any other duplicated "--" tokens to remove.

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Cursor Bugbot has reviewed your changes and found 2 potential issues.

Bugbot Autofix is OFF. To automatically fix reported issues with Cloud Agents, enable autofix in the Cursor dashboard.

[[ -f "${HOME}/Library/Application Support/kiro-cli/shell/zprofile.post.zsh" ]] && builtin source "${HOME}/Library/Application Support/kiro-cli/shell/zprofile.post.zsh"

# Added by Obsidian
path_append "/Applications/Obsidian.app/Contents/MacOS"
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Machine-specific Obsidian path accidentally committed

Medium Severity

A machine-specific path_append "/Applications/Obsidian.app/Contents/MacOS" with a # Added by Obsidian comment was committed to the shared dotfiles repo. This was auto-generated by the Obsidian app and is not portable. It also appears after the Kiro CLI post block, which explicitly states "Keep at the bottom of this file," breaking the expected file structure.

Fix in Cursor Fix in Web

- ${summary} = 1-line imperative (<=72 chars)
- ${body} = 1–3 bullets (optional)
- Commands:
- git add -A -- -- ${file1} ${file2} ${fileN}
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Double -- in git add causes pathspec error

Medium Severity

The git add template uses git add -A -- -- ${files} with a double --. After the first -- ends option parsing, the second -- becomes a literal pathspec. Since no file named -- exists, git will error with fatal: pathspec '--' did not match any files, breaking the agent commit workflow. The correct form (single --) is already used in commit-style.mdc.

Additional Locations (1)

Fix in Cursor Fix in Web

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Actionable comments posted: 9

♻️ Duplicate comments (1)
.config/fish/functions/_pure_check_for_new_release.fish (1)

10-10: ⚠️ Potential issue | 🟠 Major

Keep the printed Fisher command plain-text for copy/paste.

Line 10 still injects ANSI escapes into the command itself ($latest is wrapped in color codes), so copied commands can be unreliable in some terminals.

💡 Proposed fix
-            echo -e (_pure_set_color $pure_color_success)"fisher install pure-fish/pure@"(_pure_set_color $pure_color_info)$latest(_pure_set_color $pure_color_normal)"\n"
+            echo -e (_pure_set_color $pure_color_success)"fisher install pure-fish/pure@$latest"(_pure_set_color $pure_color_normal)"\n"
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_check_for_new_release.fish at line 10, The
echoed Fisher install command in _pure_check_for_new_release.fish incorrectly
injects ANSI color escapes into the command by wrapping $latest with
_pure_set_color calls; change the echo so the actual command text (fisher
install pure-fish/pure@$latest) is emitted as plain text without color wrappers
around $latest while you may still color surrounding labels using
_pure_set_color and the pure_color_success/info/normal variables so copied
commands are clean for copy/paste.
🧹 Nitpick comments (1)
.config/karabiner/karabiner.json (1)

137-158: Redundant caps_lock mapping in device-specific section.

The caps_lock -> left_control mapping (lines 138-147) is already defined at the profile level (lines 163-173), which applies to all keyboards. The device-specific entry is redundant and can be removed to reduce maintenance overhead.

♻️ Suggested simplification
           "simple_modifications": [
-            {
-              "from": {
-                "key_code": "caps_lock"
-              },
-              "to": [
-                {
-                  "key_code": "left_control"
-                }
-              ]
-            },
             {
               "from": {
                 "key_code": "right_control"
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/karabiner/karabiner.json around lines 137 - 158, Remove the
redundant device-specific simple_modifications entry that maps "caps_lock" to
"left_control" in the device rule: locate the device's "simple_modifications"
array and delete the object whose "from" has "key_code": "caps_lock" (the
mapping that duplicates the profile-level caps_lock -> left_control); keep the
other device-specific mapping (right_control -> apple_vendor_top_case_key_code:
keyboard_fn) intact so only the duplicate mapping is removed.
🤖 Prompt for all review comments with AI agents
Verify each finding against the current code and only fix it if needed.

Inline comments:
In @.agents/commands/check-similarity.md:
- Around line 11-13: Several fenced code blocks in the Markdown are missing
language specifiers which triggers markdownlint warnings; update each opening
triple-backtick for the blocks containing the command example starting with
"`similarity-ts .`", the English translation block that begins with "Run
`similarity-ts .`...", and the result/example block that starts with "Function:
functionName (file.ts:startLine-endLine) ..." to include a language tag
(preferably text) so they read ```text; ensure any other similar unlabeled
fenced blocks are also updated to include an appropriate language identifier.

In @.agents/skills/create-pr/scripts/poll-pr.sh:
- Around line 23-37: In the flag parsing switch cases for --pr, --repo,
--interval, and --minutes in poll-pr.sh (the case branches currently using
pr="$2", repo="$2", interval="$2", minutes="$2"), guard against set -u
unbound-variable errors by first checking that a non-empty next argument exists
and does not start with a hyphen; if the check fails, print a usage/error and
exit. Replace direct uses of "$2" with a guarded test (e.g., test for "${2:-}"
presence and that it doesn't match /^-/) before assigning to pr, repo, interval,
or minutes so missing values produce a friendly error instead of crashing.

In @.agents/skills/create-pr/SKILL.md:
- Line 83: Update the guidance for cleaning up a worktree: when using the ask
user tool (`request_user_input`) to confirm cleanup, run `git worktree remove
<worktree_path> --force` (include the worktree path) to remove only the worktree
checkout, and if you also want to delete the local branch run a separate `git
branch -D <branch>` command; clarify the text so it no longer implies `git
worktree remove --force` deletes branches and explicitly shows both commands and
their distinct effects.

In @.config/fish/functions/_pure_check_for_new_release.fish:
- Around line 6-9: Guard against empty output from
pure_get_latest_release_version and quote operands before comparing: ensure you
check that the variable latest (set by pure_get_latest_release_version
"pure-fish/pure") is non-empty (e.g., test -n "$latest") and then perform the
version comparison with both sides quoted (compare "v$pure_version" to
"$latest") so the test in _pure_check_for_new_release.fish never receives
malformed/missing operands.

In @.config/fish/functions/_pure_prompt_git_pending_commits.fish:
- Around line 8-13: The parsing of `git rev-list --left-right --count
'HEAD...@{upstream}'` into the `git_status` array (used to set `commit_to_push`
and `commit_to_pull`) must be validated before doing numeric `-gt` tests; modify
the block that runs `command git rev-list ... | read --local --array git_status`
to capture its output into a local variable, split/assign into `git_status`,
check that `count $git_status` equals 2 and both elements are non-empty and
numeric, and return early (or skip the push/pull checks) if this validation
fails so the subsequent `if test "$commit_to_push" -gt 0` and the corresponding
pull check cannot error. Ensure you reference the existing variables
`git_status`, `commit_to_push`, and `commit_to_pull` and the numeric tests when
implementing the guard.

In @.config/fish/functions/pure_get_latest_release_version.fish:
- Around line 4-7: The current pure_get_latest_release_version function silently
returns empty output on curl HTTP errors or when the regex fails; modify the
curl invocation to use --fail --show-error (or --silent --show-error --fail) so
curl returns non-zero on HTTP 4xx/5xx and emits errors, capture curl's exit
status and fail fast if non-zero, and after piping to string match --regex
verify the captured tag_name is non-empty and exit non-zero with an explanatory
error message if the regex fails; update any callers to expect non-zero exit on
failure or propagate the error from pure_get_latest_release_version.

In @.github/workflows/stylua.yml:
- Around line 25-27: Replace the mutable action tag "taiki-e/install-action@v2"
with the action's immutable commit SHA in both places where it's used (the
"uses: taiki-e/install-action@v2" entries shown in the diff), e.g., change to
the full commit SHA that corresponds to v2 and add an inline comment like "# v2"
for readability; update both occurrences so the workflow is pinned to a specific
commit SHA rather than a floating tag.

In `@Makefile`:
- Around line 29-30: The Makefile currently runs "@shellcheck -S error -s sh
install.sh" which only lints install.sh and misses other tracked .sh scripts,
and it runs "@shellcheck -S error -s bash .zshenv .zprofile .zshrc" which
incorrectly treats Zsh startup files as Bash; update the Makefile so shellcheck
runs over all tracked shell scripts (e.g., replace the single filename with a
generated list like the output of "git ls-files '*.sh'" or a glob such as
"*.sh") and remove Zsh files from shellcheck invocation; for Zsh files either
omit them from ShellCheck or handle them with a Zsh-specific linter, and ensure
the Makefile entries referencing "@shellcheck -S error -s sh install.sh" and
"@shellcheck -S error -s bash .zshenv .zprofile .zshrc" are replaced
accordingly.

In `@scripts/format/json.sh`:
- Around line 52-55: The script currently creates TMP_JSON with mktemp in TMPDIR
and then writes back using cat "$TMP_JSON" > "$f", which can truncate the target
and is not atomic; change TMP_JSON creation to create the temporary file in the
same directory as the target (e.g., use mktemp "${f%/*}/dotfiles-jsonfmt.XXXXXX"
or create "$f".tmp) so mv can atomically replace the original, run jq to write
into that local temp, then use mv "$TMP_JSON" "$f" to perform an atomic rename
and ensure you remove the temp on failure; update references to TMP_JSON, the
mktemp invocation, and the write-back step (where cat > "$f" is used)
accordingly.

---

Duplicate comments:
In @.config/fish/functions/_pure_check_for_new_release.fish:
- Line 10: The echoed Fisher install command in _pure_check_for_new_release.fish
incorrectly injects ANSI color escapes into the command by wrapping $latest with
_pure_set_color calls; change the echo so the actual command text (fisher
install pure-fish/pure@$latest) is emitted as plain text without color wrappers
around $latest while you may still color surrounding labels using
_pure_set_color and the pure_color_success/info/normal variables so copied
commands are clean for copy/paste.

---

Nitpick comments:
In @.config/karabiner/karabiner.json:
- Around line 137-158: Remove the redundant device-specific simple_modifications
entry that maps "caps_lock" to "left_control" in the device rule: locate the
device's "simple_modifications" array and delete the object whose "from" has
"key_code": "caps_lock" (the mapping that duplicates the profile-level caps_lock
-> left_control); keep the other device-specific mapping (right_control ->
apple_vendor_top_case_key_code: keyboard_fn) intact so only the duplicate
mapping is removed.

ℹ️ Review info

Configuration used: defaults

Review profile: CHILL

Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 8a2922c and 00e8cb8.

📒 Files selected for processing (37)
  • .agents/commands/check-similarity.md
  • .agents/commands/worktree-pr.md
  • .agents/skills/create-pr/SKILL.md
  • .agents/skills/create-pr/scripts/poll-pr.sh
  • .agents/skills/create-pr/scripts/triage-pr.sh
  • .config/fish/completions/bun.fish
  • .config/fish/conf.d/_pure_init.fish
  • .config/fish/conf.d/pure.fish
  • .config/fish/functions/_pure_check_for_new_release.fish
  • .config/fish/functions/_pure_format_time.fish
  • .config/fish/functions/_pure_parse_git_branch.fish
  • .config/fish/functions/_pure_prefix_root_prompt.fish
  • .config/fish/functions/_pure_prompt_aws_profile.fish
  • .config/fish/functions/_pure_prompt_current_folder.fish
  • .config/fish/functions/_pure_prompt_git.fish
  • .config/fish/functions/_pure_prompt_git_dirty.fish
  • .config/fish/functions/_pure_prompt_git_pending_commits.fish
  • .config/fish/functions/_pure_prompt_transient.fish
  • .config/fish/functions/_pure_set_color.fish
  • .config/fish/functions/pure_get_latest_release_version.fish
  • .config/ghostty/config
  • .config/karabiner/karabiner.json
  • .config/mise/config.toml
  • .config/nvim/lazy-lock.json
  • .config/nvim/lazyvim.json
  • .github/workflows/stylua.yml
  • .zprofile
  • .zshrc
  • Makefile
  • docs/tasks/lessons.md
  • docs/tasks/todo.md
  • scripts/format.sh
  • scripts/format/fish.sh
  • scripts/format/json.sh
  • scripts/format/lua.sh
  • scripts/format/shell.sh
  • scripts/format/toml.sh
✅ Files skipped from review due to trivial changes (2)
  • .config/fish/completions/bun.fish
  • .config/nvim/lazy-lock.json
🚧 Files skipped from review as they are similar to previous changes (17)
  • .config/fish/functions/_pure_parse_git_branch.fish
  • .config/fish/functions/_pure_prompt_git_dirty.fish
  • .agents/skills/create-pr/scripts/triage-pr.sh
  • .config/fish/functions/_pure_prompt_git.fish
  • .config/ghostty/config
  • docs/tasks/todo.md
  • docs/tasks/lessons.md
  • .config/fish/functions/_pure_prompt_current_folder.fish
  • .config/fish/functions/_pure_prompt_transient.fish
  • .config/fish/conf.d/_pure_init.fish
  • .config/fish/conf.d/pure.fish
  • .config/fish/functions/_pure_format_time.fish
  • .zprofile
  • .config/fish/functions/_pure_set_color.fish
  • .agents/commands/worktree-pr.md
  • .config/mise/config.toml
  • .config/fish/functions/_pure_prompt_aws_profile.fish

Comment on lines +23 to +37
--pr)
pr="$2"
shift 2
;;
--repo)
repo="$2"
shift 2
;;
--interval)
interval="$2"
shift 2
;;
--minutes)
minutes="$2"
shift 2
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⚠️ Potential issue | 🟠 Major

Guard value-taking flags to prevent unbound-variable exits.

With set -u, passing --pr, --repo, --interval, or --minutes without a value crashes on $2 expansion instead of returning a friendly usage error.

Proposed fix
 while [[ $# -gt 0 ]]; do
   case "$1" in
     --pr)
+      if [[ $# -lt 2 || "$2" == --* ]]; then
+        echo "Missing value for --pr" >&2
+        usage >&2
+        exit 1
+      fi
       pr="$2"
       shift 2
       ;;
     --repo)
+      if [[ $# -lt 2 || "$2" == --* ]]; then
+        echo "Missing value for --repo" >&2
+        usage >&2
+        exit 1
+      fi
       repo="$2"
       shift 2
       ;;
     --interval)
+      if [[ $# -lt 2 || "$2" == --* ]]; then
+        echo "Missing value for --interval" >&2
+        usage >&2
+        exit 1
+      fi
       interval="$2"
       shift 2
       ;;
     --minutes)
+      if [[ $# -lt 2 || "$2" == --* ]]; then
+        echo "Missing value for --minutes" >&2
+        usage >&2
+        exit 1
+      fi
       minutes="$2"
       shift 2
       ;;
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/scripts/poll-pr.sh around lines 23 - 37, In the
flag parsing switch cases for --pr, --repo, --interval, and --minutes in
poll-pr.sh (the case branches currently using pr="$2", repo="$2", interval="$2",
minutes="$2"), guard against set -u unbound-variable errors by first checking
that a non-empty next argument exists and does not start with a hyphen; if the
check fails, print a usage/error and exit. Replace direct uses of "$2" with a
guarded test (e.g., test for "${2:-}" presence and that it doesn't match /^-/)
before assigning to pr, repo, interval, or minutes so missing values produce a
friendly error instead of crashing.


16. After successful merge, check if we're in a git worktree:
- Run: `[ "$(git rev-parse --git-common-dir)" != "$(git rev-parse --git-dir)" ]`
- **If in a worktree**: Use the ask user question tool (`request_user_input`) to ask if they want to clean up the worktree. If yes, run `git worktree remove --force` to remove the worktree and local branch, then switch back to the main worktree.
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⚠️ Potential issue | 🟠 Major

🧩 Analysis chain

🏁 Script executed:

cat -n .agents/skills/create-pr/SKILL.md | sed -n '75,90p'

Repository: posaune0423/dotfiles

Length of output: 966


🌐 Web query:

git worktree remove command documentation path argument branch deletion

💡 Result:

  • Documentation path/argument: git worktree remove [-f|--force] <worktree> where <worktree> is a worktree identifier, usually its path (relative or absolute). If the last path component is unique among your worktrees, you can use that shorter suffix (e.g., ghi or def/ghi).[1]
  • What it removes: it removes the worktree checkout (and its administrative link). It refuses if the worktree is “unclean” unless you pass --force (and requires --force twice for locked worktrees).[1]
  • Does it delete the branch? No—branch deletion is separate. After removing the worktree (so the branch is no longer checked out anywhere), delete the branch with git branch -d <branch> (or -D).[2]
  • If the worktree directory is already gone: use git worktree prune to clean up stale worktree metadata, then delete the branch.[1][3]

Sources
[1] Git official docs: git-worktree manual (remove, force behavior, and <worktree> identification rules). (git-scm.com)
[2] Stack Overflow: git worktree remove does not delete the branch; use git branch -d/-D. (stackoverflow.com)
[3] Stack Overflow: if the directory was removed manually, run git worktree prune. (stackoverflow.com)

Citations:


git worktree remove --force on line 83 is incomplete and misleading.

The command is missing the worktree path argument and incorrectly implies it deletes the local branch. Per git documentation, git worktree remove <worktree_path> removes only the worktree checkout; branch deletion requires a separate git branch -D <branch> command.

Update line 83 to include the path argument and clarify that branch cleanup is separate:

Proposed fix
-    - **If in a worktree**: Use the ask user question tool (`request_user_input`) to ask if they want to clean up the worktree. If yes, run `git worktree remove --force` to remove the worktree and local branch, then switch back to the main worktree.
+    - **If in a worktree**: Use the ask user question tool (`request_user_input`) to ask if they want to clean up the worktree. If yes, run `git worktree remove --force <worktree_path>` to remove the worktree, then optionally delete the branch with `git branch -D <branch_name>`, and switch back to the main worktree.
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.agents/skills/create-pr/SKILL.md at line 83, Update the guidance for
cleaning up a worktree: when using the ask user tool (`request_user_input`) to
confirm cleanup, run `git worktree remove <worktree_path> --force` (include the
worktree path) to remove only the worktree checkout, and if you also want to
delete the local branch run a separate `git branch -D <branch>` command; clarify
the text so it no longer implies `git worktree remove --force` deletes branches
and explicitly shows both commands and their distinct effects.

Comment on lines +6 to +9
set latest (pure_get_latest_release_version "pure-fish/pure")

if test "v"$pure_version != $latest
echo -e "🔔 New version available!\n"
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⚠️ Potential issue | 🟠 Major

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🏁 Script executed:

cat -n ".config/fish/functions/_pure_check_for_new_release.fish"

Repository: posaune0423/dotfiles

Length of output: 717


🏁 Script executed:

# Check if pure_get_latest_release_version exists and what it does
rg "function pure_get_latest_release_version" -A 10

Repository: posaune0423/dotfiles

Length of output: 46


🏁 Script executed:

# Also check what version of Fish shell is expected/used
fd "fish_version\|version\|\.fishrc\|config.fish" ".config"

Repository: posaune0423/dotfiles

Length of output: 46


🏁 Script executed:

# Search in all Fish function files
rg "pure_get_latest_release_version" ".config/fish/"

Repository: posaune0423/dotfiles

Length of output: 292


🏁 Script executed:

# Check if it's a plugin function by looking at other functions
ls -la ".config/fish/functions/" | head -20

Repository: posaune0423/dotfiles

Length of output: 1488


🏁 Script executed:

# Let me verify Fish shell test behavior with empty variables by checking Fish documentation patterns
rg "test.*!=" ".config/fish/functions/" -A 2 -B 2 | head -50

Repository: posaune0423/dotfiles

Length of output: 3445


🏁 Script executed:

cat -n ".config/fish/functions/pure_get_latest_release_version.fish"

Repository: posaune0423/dotfiles

Length of output: 353


🏁 Script executed:

# Check for similar patterns with empty variable guards in the codebase
rg "set.*or return" ".config/fish/functions/" -A 2 | head -30

Repository: posaune0423/dotfiles

Length of output: 46


Guard and quote latest before comparison.

If pure_get_latest_release_version returns empty (due to network failure, API error, or rate limiting), the test at line 8 receives malformed operands. Add a non-empty guard and quote both sides to handle this safely.

💡 Proposed fix
-        set latest (pure_get_latest_release_version "pure-fish/pure")
+        set --local latest (pure_get_latest_release_version "pure-fish/pure")
+        or return

-        if test "v"$pure_version != $latest
+        if test -n "$latest"; and test "v$pure_version" != "$latest"
             echo -e "🔔 New version available!\n"
             echo -e (_pure_set_color $pure_color_success)"fisher install pure-fish/pure@"(_pure_set_color $pure_color_info)$latest(_pure_set_color $pure_color_normal)"\n"
         end
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
set latest (pure_get_latest_release_version "pure-fish/pure")
if test "v"$pure_version != $latest
echo -e "🔔 New version available!\n"
set --local latest (pure_get_latest_release_version "pure-fish/pure")
or return
if test -n "$latest"; and test "v$pure_version" != "$latest"
echo -e "🔔 New version available!\n"
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_check_for_new_release.fish around lines 6 - 9,
Guard against empty output from pure_get_latest_release_version and quote
operands before comparing: ensure you check that the variable latest (set by
pure_get_latest_release_version "pure-fish/pure") is non-empty (e.g., test -n
"$latest") and then perform the version comparison with both sides quoted
(compare "v$pure_version" to "$latest") so the test in
_pure_check_for_new_release.fish never receives malformed/missing operands.

Comment on lines +8 to +13
command git rev-list --left-right --count 'HEAD...@{upstream}' \
| read --local --array git_status
set --local commit_to_push $git_status[1]
set --local commit_to_pull $git_status[2]

if test "$commit_to_push" -gt 0 # upstream is behind local repo
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⚠️ Potential issue | 🟡 Minor

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🏁 Script executed:

# First, check if the file exists and read its content
if [ -f ".config/fish/functions/_pure_prompt_git_pending_commits.fish" ]; then
    echo "=== File exists, reading full content with line numbers ==="
    cat -n ".config/fish/functions/_pure_prompt_git_pending_commits.fish"
else
    echo "=== File not found ==="
    git ls-files ".config/fish/functions/_pure_prompt_git_pending_commits.fish" || echo "File not in git index"
fi

Repository: posaune0423/dotfiles

Length of output: 1945


🏁 Script executed:

# Also check the surrounding context to understand the full function
if [ -f ".config/fish/functions/_pure_prompt_git_pending_commits.fish" ]; then
    echo "=== Lines 1-30 with context ==="
    head -30 ".config/fish/functions/_pure_prompt_git_pending_commits.fish" | cat -n
fi

Repository: posaune0423/dotfiles

Length of output: 1837


🏁 Script executed:

# Check if there are any error handlers or guards around the git commands
rg -A 5 -B 5 'git rev-list' ".config/fish/functions/_pure_prompt_git_pending_commits.fish" || echo "Pattern not found"

Repository: posaune0423/dotfiles

Length of output: 651


🏁 Script executed:

# Check lines around line 22 mentioned in the review
if [ -f ".config/fish/functions/_pure_prompt_git_pending_commits.fish" ]; then
    echo "=== Lines 15-30 (around line 22) ==="
    sed -n '15,30p' ".config/fish/functions/_pure_prompt_git_pending_commits.fish" | cat -n
fi

Repository: posaune0423/dotfiles

Length of output: 1024


Guard git rev-list parsing before numeric comparisons.

If git rev-list fails or produces empty output, $git_status[1] and $git_status[2] will be empty, causing the -gt test on lines 13 and 22 to error. Capture the output, validate the array contains exactly 2 elements, and return early on failure.

Suggested fix
-        command git rev-list --left-right --count 'HEAD...@{upstream}' \
-            | read --local --array git_status
-        set --local commit_to_push $git_status[1]
-        set --local commit_to_pull $git_status[2]
+        set --local git_status (command git rev-list --left-right --count 'HEAD...@{upstream}' 2>/dev/null)
+        if test (count $git_status) -ne 2
+            return
+        end
+        set --local commit_to_push $git_status[1]
+        set --local commit_to_pull $git_status[2]

Applies to lines 8–11 and 22.

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
command git rev-list --left-right --count 'HEAD...@{upstream}' \
| read --local --array git_status
set --local commit_to_push $git_status[1]
set --local commit_to_pull $git_status[2]
if test "$commit_to_push" -gt 0 # upstream is behind local repo
set --local git_status (command git rev-list --left-right --count 'HEAD...@{upstream}' 2>/dev/null)
if test (count $git_status) -ne 2
return
end
set --local commit_to_push $git_status[1]
set --local commit_to_pull $git_status[2]
if test "$commit_to_push" -gt 0 # upstream is behind local repo
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/_pure_prompt_git_pending_commits.fish around lines 8
- 13, The parsing of `git rev-list --left-right --count 'HEAD...@{upstream}'`
into the `git_status` array (used to set `commit_to_push` and `commit_to_pull`)
must be validated before doing numeric `-gt` tests; modify the block that runs
`command git rev-list ... | read --local --array git_status` to capture its
output into a local variable, split/assign into `git_status`, check that `count
$git_status` equals 2 and both elements are non-empty and numeric, and return
early (or skip the push/pull checks) if this validation fails so the subsequent
`if test "$commit_to_push" -gt 0` and the corresponding pull check cannot error.
Ensure you reference the existing variables `git_status`, `commit_to_push`, and
`commit_to_pull` and the numeric tests when implementing the guard.

Comment on lines +4 to +7
curl \
--silent \
"https://api.github.com/repos/$user_repo/releases/latest" \
| string match --regex '"tag_name": "\K.*?(?=")'
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⚠️ Potential issue | 🟠 Major

🧩 Analysis chain

🏁 Script executed:

# Check if the file exists and examine its contents
cat -n .config/fish/functions/pure_get_latest_release_version.fish

Repository: posaune0423/dotfiles

Length of output: 353


🏁 Script executed:

# Verify the file structure and any related files
fd "pure_get_latest_release_version" --type f

Repository: posaune0423/dotfiles

Length of output: 46


Add error handling to fail fast on API and parse failures.

The function silently returns empty output when curl encounters HTTP errors (4xx/5xx), rate limits, network failures, or when the regex fails to extract a version. Because curl --silent suppresses error messages and curl defaults to returning exit code 0 on HTTP errors without --fail, the updater flow receives an empty string with no indication of failure.

Proposed fix
 function pure_get_latest_release_version \
     --argument-names user_repo

-    curl \
-        --silent \
-        "https://api.github.com/repos/$user_repo/releases/latest" \
-        | string match --regex '"tag_name": "\K.*?(?=")'
+    set --local latest (
+        curl \
+            --silent \
+            --show-error \
+            --fail \
+            "https://api.github.com/repos/$user_repo/releases/latest" \
+            | string match --regex --groups-only '"tag_name"\s*:\s*"([^"]+)"'
+    )
+    or return 1
+
+    echo $latest
 end
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In @.config/fish/functions/pure_get_latest_release_version.fish around lines 4 -
7, The current pure_get_latest_release_version function silently returns empty
output on curl HTTP errors or when the regex fails; modify the curl invocation
to use --fail --show-error (or --silent --show-error --fail) so curl returns
non-zero on HTTP 4xx/5xx and emits errors, capture curl's exit status and fail
fast if non-zero, and after piping to string match --regex verify the captured
tag_name is non-empty and exit non-zero with an explanatory error message if the
regex fails; update any callers to expect non-zero exit on failure or propagate
the error from pure_get_latest_release_version.

Comment on lines +29 to +30
@shellcheck -S error -s sh install.sh
@shellcheck -S error -s bash .zshenv .zprofile .zshrc
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⚠️ Potential issue | 🟠 Major

🧩 Analysis chain

🏁 Script executed:

#!/bin/bash
set -euo pipefail

echo "Configured shellcheck commands:"
rg -n 'shellcheck' Makefile .github/workflows/stylua.yml 2>/dev/null || echo "No shellcheck configs found in those files"

echo
echo "Tracked shell scripts in repo:"
git ls-files '*.sh' | head -20

echo
echo "All zsh-related files:"
git ls-files | grep -E '\.(zsh|zshrc|zshenv|zprofile)$' || echo "No explicit zsh files found"

echo
echo "Contents of Makefile (around lint target):"
sed -n '25,35p' Makefile

Repository: posaune0423/dotfiles

Length of output: 1462


Shell lint misses multiple .sh files and incorrectly validates Zsh startup files.

Line 29 only checks install.sh, missing 9 other tracked shell scripts (including agent skills and formatters). Line 30 runs ShellCheck in Bash mode on Zsh files, which produces incorrect diagnostics since Zsh syntax differs from POSIX/Bash.

🔧 Proposed fix
 lint: format
 	`@echo` "Running shellcheck..."
-	`@shellcheck` -S error -s sh install.sh
-	`@shellcheck` -S error -s bash .zshenv .zprofile .zshrc
+	`@shellcheck` -S error $$(git ls-files '*.sh')
+	`@zsh` -n .zshenv .zprofile .zshrc
 	`@echo` "Done."
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
@shellcheck -S error -s sh install.sh
@shellcheck -S error -s bash .zshenv .zprofile .zshrc
lint: format
`@echo` "Running shellcheck..."
`@shellcheck` -S error $$(git ls-files '*.sh')
`@zsh` -n .zshenv .zprofile .zshrc
`@echo` "Done."
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In `@Makefile` around lines 29 - 30, The Makefile currently runs "@shellcheck -S
error -s sh install.sh" which only lints install.sh and misses other tracked .sh
scripts, and it runs "@shellcheck -S error -s bash .zshenv .zprofile .zshrc"
which incorrectly treats Zsh startup files as Bash; update the Makefile so
shellcheck runs over all tracked shell scripts (e.g., replace the single
filename with a generated list like the output of "git ls-files '*.sh'" or a
glob such as "*.sh") and remove Zsh files from shellcheck invocation; for Zsh
files either omit them from ShellCheck or handle them with a Zsh-specific
linter, and ensure the Makefile entries referencing "@shellcheck -S error -s sh
install.sh" and "@shellcheck -S error -s bash .zshenv .zprofile .zshrc" are
replaced accordingly.

Comment on lines +52 to +55
TMP_JSON="$(mktemp "${TMPDIR:-/tmp}/dotfiles-jsonfmt.XXXXXX")"
if jq --indent 2 . "$f" > "$TMP_JSON" 2> /dev/null; then
if ! cat "$TMP_JSON" > "$f" 2> /dev/null; then
echo "[json] skip write failed: $f"
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⚠️ Potential issue | 🟠 Major

🧩 Analysis chain

🏁 Script executed:

cat -n scripts/format/json.sh | sed -n '45,60p'

Repository: posaune0423/dotfiles

Length of output: 680


🏁 Script executed:

# Verify the exact pattern and check if there are any mitigations in place
rg -n "cat.*TMP_JSON.*>.*\$f" scripts/format/json.sh
rg -n "mktemp" scripts/format/json.sh

Repository: posaune0423/dotfiles

Length of output: 197


🏁 Script executed:

# Double-check the cat pattern more directly
sed -n '54p' scripts/format/json.sh
# Also verify the error handling after the write attempt
sed -n '54,57p' scripts/format/json.sh

Repository: posaune0423/dotfiles

Length of output: 255


Use atomic replacement for formatted JSON writes.

Line 54 overwrites the target via redirection, which truncates first and can leave a partial or corrupt file on write failure. Additionally, the temp file in /tmp (line 52) is not guaranteed to be on the same filesystem as the target, preventing atomic moves. Use a same-directory temp file with mv for atomic replacement.

🔧 Proposed fix
-    TMP_JSON="$(mktemp "${TMPDIR:-/tmp}/dotfiles-jsonfmt.XXXXXX")"
+    TMP_DIR="$(dirname "$f")"
+    TMP_JSON="$(mktemp "$TMP_DIR/.dotfiles-jsonfmt.XXXXXX")"
     if jq --indent 2 . "$f" > "$TMP_JSON" 2> /dev/null; then
-      if ! cat "$TMP_JSON" > "$f" 2> /dev/null; then
+      if ! mv "$TMP_JSON" "$f" 2> /dev/null; then
         echo "[json] skip write failed: $f"
         SKIPPED=$((SKIPPED + 1))
+        rm -f "$TMP_JSON"
       fi
🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed.

In `@scripts/format/json.sh` around lines 52 - 55, The script currently creates
TMP_JSON with mktemp in TMPDIR and then writes back using cat "$TMP_JSON" >
"$f", which can truncate the target and is not atomic; change TMP_JSON creation
to create the temporary file in the same directory as the target (e.g., use
mktemp "${f%/*}/dotfiles-jsonfmt.XXXXXX" or create "$f".tmp) so mv can
atomically replace the original, run jq to write into that local temp, then use
mv "$TMP_JSON" "$f" to perform an atomic rename and ensure you remove the temp
on failure; update references to TMP_JSON, the mktemp invocation, and the
write-back step (where cat > "$f" is used) accordingly.

@posaune0423 posaune0423 merged commit d44fa97 into main Feb 26, 2026
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