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1.11

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@github-actions github-actions released this 08 Nov 21:46
· 28 commits to main since this release
ac9a13c

New Features

  • [sv leviathan] now also makes BX tags unique when concatenating population groups
    • provided as --bx option to concatenate_bam.py
  • new standalone script deconvolve_alignments.py that does the same thing as assign_mi.py, but also deconvolves the BX tag into hyphenated form

Fixes

  • R logic for properly parsing new --contigs option #160

Improvements

  • LOTS more guardrails with respect to validations and error handling
    • Simplified logic for file type validation and tag management in scripts
    • Enhanced error handling for missing input files across multiple scripts
    • Updated argument parser configurations for improved user guidance and error handling
    • Streamlined output methods across multiple scripts for consistency

PRs

Full Changelog: 1.10.1...1.11