fix naibr test

pdimens · Feb 20, 2025 · 69e47a7 · 69e47a7
1 parent c9140d8
commit 69e47a7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
@@ -637,7 +637,7 @@ jobs:
 #          path: .snakemake/singularity
       - name: naibr
         shell: micromamba-shell {0}
-        run: harpy sv naibr --quiet 2 -g test/genome/genome.fasta.gz -o SV/naibr  -x "-min_sv 5000" test/bam_phased && rm -r Genome
+        run: harpy sv naibr --quiet 2 -g test/genome/genome.fasta.gz -o SV/naibr test/bam_phased && rm -r Genome
       - name: naibr pop
         if: always()
         shell: micromamba-shell {0}