Test Harpy Modules

markdups and molcov #583

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Run time

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Job	Run time
Detect File Changes	3s
align BWA	2m 7s
Rebuild Container	2m 2s
assembly	0s
deconvolve	0s
demux gen1	1m 55s
align EMA	2m 8s
harpy extras	0s
freebayes	0s
impute	0s
mpileup	0s
sv leviathan	0s
sv naibr	0s
phase	0s
preflight	0s
simulate linkedreads	2m 7s
qc	0s
simulate variants	0s
align strobe	31s
	10m 53s