Number MHCs#100

Open

ALGW71 wants to merge 23 commits intomainfrom

Commits on May 1, 2025

Commits on Jun 12, 2025

Commits on Jun 13, 2025

SCFV code when missing CWC is as good as ever. Now add back in CWC and create a fallback.
ALGW71
committed
SCFV mode now working better - CWC does not work. Back to window method.
ALGW71
committed
On test set 6/1133 are misnumbered but still ID as SCFVs.
ALGW71
committed

Commits on Jul 1, 2025

TCR cut off implemented and continue statement skips all MHC.
ALGW71
committed