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Thank you!! This worked like a charm!! |
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I installed ImmuneBuilder in a conda env with anarci, the symlinked a console script to call it to my local bin, so I could use it without activating the environment. However if I call it when the environment is not active, hmmscan is not on the path, and it crashes. I added a check to see if hmmscan is on the path and if it is not, then to check the environments bin folder. This worked for me.
I added shutil and sysconfig imports. Also, I sorted the imports using isort, but they are otherwise unchanged.