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    16 repositories

    • ercantools

      Public
      General purpose ercanlab R tools
      R
      •
      Other
      •1•0•0•0•Updated Jun 4, 2026Jun 4, 2026

    • ChIPseq

      Public
      Shell
      •2•3•0•0•Updated Apr 15, 2026Apr 15, 2026

    • 2024_Breimann_et_al

      Public
      Documentation and analysis scripts for Breimann et al. 2024
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Mar 22, 2026Mar 22, 2026

    • 2024_Aharonoff_et_al

      Public
      Scripts used in Aharonoff et al. 2024
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Nov 19, 2025Nov 19, 2025

    • 2023_Kim_cohesin

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Jan 27, 2025Jan 27, 2025

    • 2021_Breimann_et_al

      Public
      Analysis scripts for FRAP analysis
      Jupyter Notebook
      •
      MIT License
      •2•4•0•0•Updated Nov 7, 2023Nov 7, 2023

    • 2022_Kim_Jimenez_et_al

      Public
      Analysis scripts for Jimenez et al. 2021
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jun 27, 2022Jun 27, 2022

    • 2022_Morao_et_al

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated May 5, 2022May 5, 2022

    • street_et_al_2019

      Public
      Data analysis scripts for Street et al. 2019
      R
      •
      MIT License
      •0•1•0•0•Updated Jun 5, 2019Jun 5, 2019

    • RNAseq

      Public
      R
      •0•2•0•0•Updated Jun 5, 2019Jun 5, 2019

    • 2019_Paul_et_al

      Public
      A collection of scripts used in the analysis of data in (Paul, et al 2018)
      MIT License
      •0•0•0•0•Updated Nov 30, 2018Nov 30, 2018

    • chromosome_conformation_capture

      Public
      A variety of methods to analyze genome-wide chromosome conformation capture techniques, such as Hi-C and 3C-seq.
      R
      •
      MIT License
      •0•3•0•0•Updated Aug 21, 2018Aug 21, 2018

    • CNVs

      Public
      C. elegans CNVs project
      Jupyter Notebook
      •0•0•0•0•Updated Jul 5, 2018Jul 5, 2018

    • 2018_Paul_et_al

      Public
      A colleciton of scripts used in the analysis of data in (Paul, et al 2018)
      R
      •
      MIT License
      •0•2•0•0•Updated May 23, 2018May 23, 2018

    • Misc_HTseq

      Public
      0•0•0•0•Updated Feb 15, 2018Feb 15, 2018

    • genome_information

      Public
      Files that contain regions of interest, or specific subsets of the annotated genome. These are reference files used by our scripts.
      MIT License
      •0•2•0•0•Updated Feb 14, 2018Feb 14, 2018
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