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    • dpc_fam_and_struct_webapp

      Public
      In this project, We are designing and developing a browser-based web application from scratch using Django, enabling users to navigate the DPCfam and DPCstruct …
      Jupyter Notebook
      MIT License
      0100Updated Mar 6, 2026Mar 6, 2026
    • LAGE_Metadata_Extraction

      Public
      Python
      1000Updated Mar 5, 2026Mar 5, 2026
    • decos

      Public
      This is the prp decos main repository
      Python
      Other
      1100Updated Feb 27, 2026Feb 27, 2026
    • MSARC

      Public
      Code for clustering MSA representations to drive AF2 predictions toward alternative states.
      Jupyter Notebook
      MIT License
      2800Updated Jan 16, 2026Jan 16, 2026
    • This repo contains the code for replicating the figures of the paper: The Narrow Gate: Localized Image-Text Communication in Vision-Language Models (NeurIPS 202…
      Python
      0000Updated Jan 15, 2026Jan 15, 2026
    • Geometry of Tokens in Internal Representations of Large Language Models
      Jupyter Notebook
      2700Updated Dec 3, 2025Dec 3, 2025
    • This repo contains the code of the paper: Generative Image Restoration and Super-Resolution using Physics-Informed Synthetic Data for Scanning Tunneling Microsc…
      0000Updated Oct 29, 2025Oct 29, 2025
    • ZigZagLLMs

      Public
      Persistent Topological Features in Large Language Models
      Jupyter Notebook
      MIT License
      11400Updated Jun 20, 2025Jun 20, 2025
    • This repository will host the jupyter notebook to extract admissions in JSON format for the first 100 patients in the MIMIC-IV discharges
      Jupyter Notebook
      0000Updated Jun 18, 2025Jun 18, 2025
    • ExO

      Public
      ExO: Expert Opinion, is a simple webapp for pair comparison of tiff images. It displays randomized image pairs from a dataset, records user selections in a csv …
      Python
      Other
      1000Updated Apr 3, 2025Apr 3, 2025
    • A simple web (FastAPI) interface for LLM+database interactions
      Python
      0000Updated Mar 14, 2025Mar 14, 2025
    • Nastro

      Public
      Pipeline developed for the analysis of long-reads data (in particular produced by ONT hardware) by Rodolfo Tolloi at Area Science Park
      Python
      Apache License 2.0
      1000Updated Mar 13, 2025Mar 13, 2025
    • DPCstruct

      Public
      Unsupervised clustering algorithm for identifying and classifying protein domains based on structural similarity.
      C++
      GNU General Public License v3.0
      0200Updated Mar 13, 2025Mar 13, 2025
    • Python
      2000Updated Feb 12, 2025Feb 12, 2025
    • A simple dashboard for laboratories. Django/Wagtail based.
      Python
      2000Updated Dec 2, 2024Dec 2, 2024
    • PLM4Muts

      Public
      Python
      0900Updated Nov 4, 2024Nov 4, 2024