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    • imc

      Public
      A package for the analysis of Imaging Mass Cytometry data
      Python
      51371Updated Feb 24, 2025Feb 24, 2025
    • ggo-imc

      Public
      Jupyter Notebook
      0000Updated Feb 17, 2025Feb 17, 2025
    • utag

      Public
      Python
      103420Updated Apr 3, 2024Apr 3, 2024
    • Python
      0102Updated Mar 26, 2024Mar 26, 2024
    • utuc-imc

      Public
      Python
      0000Updated Nov 30, 2023Nov 30, 2023
    • Python
      0100Updated Jan 23, 2023Jan 23, 2023
    • Python
      0100Updated Sep 9, 2022Sep 9, 2022
    • msuc-imc

      Public
      Python
      0000Updated Apr 17, 2022Apr 17, 2022
    • Python
      0000Updated Apr 17, 2022Apr 17, 2022
    • Jupyter Notebook
      0000Updated Mar 7, 2022Mar 7, 2022
    • covid-metabolomics

      Public archive
      Python
      0100Updated Sep 9, 2021Sep 9, 2021
    • covid-flowcyto

      Public archive
      COVID19 profiling of peripheral immune system with flow cytometry
      Python
      0500Updated Jul 2, 2021Jul 2, 2021
    • Contains files regarding the Spring 2021 research elective course working towards predicting which prediabetic patients develop diabetes and which do not develop diabetes.
      0000Updated Apr 10, 2021Apr 10, 2021
    • covid-imc

      Public
      COVID19 profiling of lung tissue with imaging mass cytometry (IMC)
      Python
      41120Updated Mar 29, 2021Mar 29, 2021
    • Daemon manager of IMC data transfered over Box.com
      Python
      0000Updated Dec 7, 2020Dec 7, 2020
    • A comprehensive framework for the analysis of ChIP-seq data
      C
      GNU General Public License v3.0
      0510Updated Nov 25, 2020Nov 25, 2020
    • scTCRseq

      Public
      Processing of single cell RNAseq data for the recovery of TCRs in python
      Python
      GNU Affero General Public License v3.0
      42710Updated Nov 25, 2020Nov 25, 2020
    • Imaging mass cytometry pipeline based on ilastik and CellProfiler
      Python
      1200Updated Oct 7, 2020Oct 7, 2020
    • atacflow

      Public
      Analysis pipeline for ATACseq data using Nextflow
      Python
      5000Updated Jul 14, 2019Jul 14, 2019
    • TCRVseq

      Public
      Determine T cell receptor (TCR) variable sequence genes from bulk RNAseq data
      Python
      GNU Affero General Public License v3.0
      0300Updated Dec 6, 2017Dec 6, 2017
    20 repositories found. List is sorted by Last pushed in descending order.