Integrated Content Operating System

Single source of truth for Dr. Shailesh Singh's content creation, research, and writing workflows.

Fresh Machine Setup (Required)

1. Create .env from .env.example and set NCBI_API_KEY (plus other keys).
2. Install PubMed MCP dependencies:

   cd pubmed-mcp-server
   npm install

3. MCP config is already wired in .mcp.json and points to pubmed-mcp-server/dist/index.js.

Quick Start

python pipelines/twitter-content/generate.py "What are statin side effects?"
python research-engine/run_pipeline.py --quick
python rag-pipeline/src/knowledge_pipeline.py --query "SGLT2 heart failure"

Notes

• .env is intentionally not committed.
• PubMed MCP is mandatory for research outputs.