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@nicolerg nicolerg released this 27 Jan 02:39

Summary

Changes compared to https://github.com/broadinstitute/ssGSEA2.0:

  • Clean up dependencies
  • Convert to R package ssGSEA2
  • Rename ssGSEA2 to run_ssGSEA2 to avoid documentation conflicts with package name
  • Separate functions and add doc skeletons
  • Add output.directory argument and write all outputs there instead of PWD
  • In accordance with Bioconductor standards, replace '.' with '_' in function names
  • Add example

Full Changelog: https://github.com/nicolerg/ssGSEA2/commits/v1.0.0