Genomics Unified Schema (GUS)

Definition files for a relational database schema that has been deployed in Oracle and PostgreSQL

See original documentation here.

Dependencies

• yarn / npm / ant
• environment variables for GUS_HOME and PROJECT_HOME

Installation instructions

• EuPathDB-DevTools | Installing the GUS and ApiDB Schemas

Operating instructions

• the standard GUS schemas: CORE, DoTS, SRes, etc.
• the GUS Perl and Java object layers (objects that represent the standard GUS tables)

Manifest

• Definition/bin :: scripts to generate XML files that can be used with LoadGusXml plugin or describing tables, columns, primary keys, and foreign keys
• Definition/config :: GUS schema definition files
• images :: diagrams of standard GUS schemas