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3 changes: 1 addition & 2 deletions .github/nglview-gha.yml
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,8 @@ dependencies:
- matplotlib
- moviepy
- imageio
- pillow<11.2.1
- pillow
- numpy
- numpy<2.3.0
- rdkit
- mdanalysis
- mdtraj
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4 changes: 2 additions & 2 deletions devtools/circleci/install_miniconda.sh
Original file line number Diff line number Diff line change
Expand Up @@ -10,9 +10,9 @@ yum install -y \
# export PATH=/root/miniconda3/bin:$PATH
export PATH=/opt/conda/bin/:$PATH
conda update --yes --all
conda install --yes conda-build anaconda-client numpy<2.3 matplotlib
conda install --yes conda-build anaconda-client numpy matplotlib
conda info
conda install --yes jupyter notebook nose numpy<2.3 coverage cython netcdf4
conda install --yes jupyter notebook nose numpy coverage cython netcdf4
# pytraj
pip install pytraj
# mdanalysis
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2 changes: 1 addition & 1 deletion devtools/conda-recipe/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ requirements:
- traitlets
run:
- python
- numpy<2.3
- numpy
- ipywidgets
- notebook >4.1
- jupyter
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2 changes: 1 addition & 1 deletion devtools/outdated/nglview-jupyterlab.sh
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ ipywidgets_version=7.1.2
echo "nglview root folder: $nglview_src"
echo "Creating env $env"

conda create -n $env python=${python_version} numpy<2.3 nomkl -y
conda create -n $env python=${python_version} numpy nomkl -y
source activate $env
conda install setuptools -c conda-forge --force -y
conda install notebook==${notebook_version} -c conda-forge -y
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4 changes: 2 additions & 2 deletions environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ dependencies:
- coveralls

# Scientific
- numpy<2.3
- numpy
- pandas
- ase
- parmed
Expand All @@ -33,4 +33,4 @@ dependencies:
- matplotlib
- moviepy
- imageio
- pillow<11.2.1
- pillow
2 changes: 1 addition & 1 deletion pip-requirements-test.txt
Original file line number Diff line number Diff line change
Expand Up @@ -19,4 +19,4 @@ simpletraj
matplotlib
moviepy==0.2.2.11
imageio
pillow<11.2.1
pillow
2 changes: 1 addition & 1 deletion setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -71,7 +71,7 @@ def pre_dist():
'notebook>=7',
'jupyterlab>=3',
'jupyterlab_widgets',
'numpy<2.3',
'numpy',
],
'extras_require': {
"simpletraj": ["simpletraj"],
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