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Issues list

Add samtools markdup for UMI aware markdup enhancement Improvement for existing functionality
#181 opened Mar 3, 2025 by matthdsm
Add nf-test sharding enhancement Improvement for existing functionality
#176 opened Feb 27, 2025 by nvnieuwk 1.2.0
Thoughts on submitting RNAVar to a journal? question Further information is requested
#147 opened Jun 26, 2024 by Shaun-Regenbaum
Add samtools mpileup as an alternative variant caller enhancement Improvement for existing functionality
#110 opened Nov 28, 2023 by Leon-Bichmann
Add trimming step enhancement Improvement for existing functionality
#96 opened Aug 15, 2023 by bounlu
Singularity container retrieval failed bug Something isn't working
#93 opened Jun 1, 2023 by hakobyansiras
Genome Version: 20201 is INCOMPATIBLE with running STAR version: 2.7.9a bug Something isn't working
#92 opened May 31, 2023 by meherpreethi777
8
ENSEMBLVEP fails after module update bug Something isn't working
#84 opened Feb 8, 2023 by bounlu 1.2.0
3
Single cell somatic mutations enhancement Improvement for existing functionality
#77 opened Nov 22, 2022 by cutleraging
1
download_cache.nf not found bug Something isn't working
#71 opened Sep 23, 2022 by gianfilippo 1.2.0
3
Optional filter out RNA editing variants enhancement Improvement for existing functionality
#63 opened Jun 29, 2022 by ojziff
Summary metrics of haplotypecaller.filtered.vcf enhancement Improvement for existing functionality
#59 opened Jun 20, 2022 by ojziff
@praveenraj2018
1
SIFT missense predictions for genomes enhancement Improvement for existing functionality
#20 opened Feb 1, 2022 by m3hdad
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