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Update link to featureCounts in README.md (current link is dead) #474

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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -62,7 +62,7 @@ You can find numerous talks on the [nf-core events page](https://nf-co.re/events
8. Call broad/narrow peaks ([`MACS3`](https://github.com/macs3-project/MACS))
9. Annotate peaks relative to gene features ([`HOMER`](http://homer.ucsd.edu/homer/download.html))
10. Create consensus peakset across all samples and create tabular file to aid in the filtering of the data ([`BEDTools`](https://github.com/arq5x/bedtools2/))
11. Count reads in consensus peaks ([`featureCounts`](http://bioinf.wehi.edu.au/featureCounts/))
11. Count reads in consensus peaks ([`featureCounts`](https://subread.sourceforge.net/featureCounts.html))
12. PCA and clustering ([`R`](https://www.r-project.org/), [`DESeq2`](https://bioconductor.org/packages/release/bioc/html/DESeq2.html))
6. Create IGV session file containing bigWig tracks, peaks and differential sites for data visualisation ([`IGV`](https://software.broadinstitute.org/software/igv/)).
7. Present QC for raw read, alignment, peak-calling and differential binding results ([`MultiQC`](http://multiqc.info/), [`R`](https://www.r-project.org/))
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