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Align to latest Nextflow version and bump to groovy 4.0 #91

Merged
merged 7 commits into from
Oct 10, 2024
Merged

Align to latest Nextflow version and bump to groovy 4.0 #91

merged 7 commits into from
Oct 10, 2024

Commits on Oct 10, 2024

  1. Prepare groovy version bump (fixes build language related build issues) 

    Signed-off-by: Till Englert <[email protected]>
    @tillenglert
    tillenglert committed Oct 10, 2024
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  2. Bump groovy to version 4 and align to latest nextflow 

    Signed-off-by: Till Englert <[email protected]>
    @tillenglert
    tillenglert committed Oct 10, 2024
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  3. Compability with latest stable: nextflow:v24.04.4 

    Signed-off-by: Till Englert <[email protected]>
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    tillenglert committed Oct 10, 2024
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  4. Use gradle update to version 8.9 

    Signed-off-by: Till Englert <[email protected]>
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    tillenglert committed Oct 10, 2024
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  5. Explicitly define java toolchain 

    Signed-off-by: Till Englert <[email protected]>
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    tillenglert committed Oct 10, 2024
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  6. Increment the nextflow version of testing to 24.08-edge 

    Signed-off-by: Till Englert <[email protected]>
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    tillenglert committed Oct 10, 2024
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  7. Cast memory later, so the calculation to GB is performed using the … 

    …full precision data. Also add a comment, why it is casted and add TODO

Signed-off-by: Till Englert <[email protected]>
    @tillenglert
    tillenglert committed Oct 10, 2024
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