Code for the SETD paper.

Getting started

Important

This is not a Julia package. You cannot install it with add SETD. Tested with julia v1.10.

Prerequisites

You will need a working installation of Julia, jupyterlab, jupytext, and IJulia to generate and run the notebooks. If you can run Julia notebooks on your machine, proceed to the next step.

• Install Julia. Using juliaup is recommended.
• Install jupyterlab and jupytext using anaconda or any other way you prefer.
• Install IJulia using Julia package manager.

Running the notebooks

• Clone/download the repository.
• Install the Julia dependencies by activating the project and then instantiating it.
• The notebooks are converted and stored under jl/ folder as plain .jl files using jupytext. To recreate the notebooks from these files run make notebooks and then move it to the base directory of the repository. You have to manually move them to avoid overwriting any notebooks you have previously generated.
• If you do not have make, you can convert them directly by running jupytext --to ipynb filename.jl.
• Create data and figs folders to generate data and figures.
• Now you can run jupyterlab and start running the notebooks.