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ParGenes

A massively parallel tool for model selection and tree inference on thousands of genes

Requirement

  • git
  • cmake
  • One MPI installation
  • python 3

Installation

Please use git, and clone with --recursive!!!

git clone --recursive git@github.com:BenoitMorel/ParGenes.git

To build the sources:

./install.sh

Running

See the wiki (https://github.com/BenoitMorel/ParGenes/wiki)

Documentation and Support

Documentation can be found in the github wiki (work in progress).

Also please check the online help with python3 pargenes/pargenes.py --help

If still in doubt, please feel free to post to the RAxML google group.

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A massively parallel tool for model selection and tree inference on thousands of genes

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  • C++ 55.6%
  • Python 40.2%
  • Shell 2.8%
  • CMake 1.4%