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105 followers · 110 following

Achievements

Achievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Sharkx3

Achievements

Achievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Sharkx3

Organizations

@microbiome

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microsud/README.md

microsud (Sudarshan A. Shetty)

github stats

🚀 You can see my personal website at microsud.github.io

⛓️ Follow me on Twitter @gutmicrobe

👥 Take a look at my LinkedIn profile: linkedin.com/in/sudarshan-shetty

🔬 My research at Google Scholar

R/BioC Contributions:

Package BioC-release
microbiome
mia
microbiomeDataSets
miaViz

Developer/Maintainer:

Package GitHub
microbiomeutilities Source code
biomeUtils Source code
biomeViz Source code
syncomR Source code
chkMocks Source code
dysbiosisR Source code

Resources:

Resource Role
Tools-Microbiome-Analysis Creator and Maintainer
Microbial-bioinformatics-introductory-course-Material-2018 Creator and Maintainer
Orchestrating Microbiome Analysis Contributor
Automate Microbiome Analysis Creator

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  1. microbiome/microbiome microbiome/microbiome Public

    microbiome R package

    R 289 54

  2. microbiomeutilities microbiomeutilities Public

    The is mostly a wrapper tool using phyloseq and microbiome R packages.

    R 33 7

  3. Tools-Microbiome-Analysis Tools-Microbiome-Analysis Public

    A list of R environment based tools for microbiome data exploration, statistical analysis and visualization

    CSS 110 46

  4. mibwurrepo/MIB20306MicrobialPhysiology mibwurrepo/MIB20306MicrobialPhysiology Public

    Teaching MIB20306: Interactive app created to teach proteomics guided investigation of bacterial metabolism. We use Intestinimonas butyriciproducens as example.

    R 1

  5. microbiomeutilities-shiny microbiomeutilities-shiny Public

    Try it out- Want to develop this as a teaching tool to demonstrate commonly done microbial diversity analysis methods/concepts

    R 1

  6. Microbial-bioinformatics-introductory-course-Material-2018 Microbial-bioinformatics-introductory-course-Material-2018 Public

    Forked from mibwurrepo/Microbial-bioinformatics-introductory-course-Material-2018

    R 2 1