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1. pyfaidx pyfaidx Public

   Efficient pythonic random access to fasta subsequences

   Python 461 75

2. Novartis/pisces Novartis/pisces Public

   PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

   Python 29 3

3. fastqp fastqp Public

   Simple FASTQ quality assessment using Python

   Python 109 14

4. simplesam simplesam Public

   Simple pure Python SAM parser and objects for working with SAM records

   Python 62 8

5. hamstring hamstring Public

   Tools for generating and decoding error-correcting DNA barcodes

   Python 16 4