Ruff fixes

[A-CGray]

Purpose

Updates repo to pass our new formatting and linting checks. There are a lot of whitespace changes here so once this PR is merged we can add the commit hash to a .git-blame-ignore-revs file.

Expected time until merged

Type of change

• Bugfix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (non-backwards-compatible fix or feature)
• Code style update (formatting, renaming)
• Refactoring (no functional changes, no API changes)
• Documentation update
• Maintenance update
• Other (please describe)

Testing

Checklist

• I have run ruff check and ruff format to make sure the Python code adheres to PEP-8 and is consistently formatted
• I have formatted the Fortran code with fprettify or C/C++ code with clang-format as applicable
• I have run unit and regression tests which pass locally with my changes
• I have added new tests that prove my fix is effective or that my feature works
• I have added necessary documentation

[codecov]

Codecov Report

❌ Patch coverage is 25.00000% with 15 lines in your changes missing coverage. Please review.
✅ Project coverage is 41.21%. Comparing base (8f6696b) to head (fa56f96).
⚠️ Report is 2 commits behind head on main.

Files with missing lines	Patch %	Lines
adflow/pyADflow.py	25.00%	12 Missing ⚠️
adflow/mphys/mphys_adflow.py	0.00%	2 Missing ⚠️
adflow/pyWingCG.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #393      +/-   ##
==========================================
+ Coverage   41.19%   41.21%   +0.01%     
==========================================
  Files          13       13              
  Lines        4127     4125       -2     
==========================================
  Hits         1700     1700              
+ Misses       2427     2425       -2     

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[sanjan98]

Ignoring codecov/patch failed test
Ruff mainly fixes whitespace issues in the Fortran files and some string conventions in the python files