MOMLIN

Multi-Modal and Multi-Omics Machine Learning Integration Pipeline for Drug Response Prediction

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Reproducibility

To run the codes and reproduce the results supporting our manuscript, please execute the following scripts:

1. MOMLIN core algorithm

File: MOMLIN_example.m
Location: MOMLIN_softwar/

• Execution of the MOMLIN algorithm with 3-fold cross-validation
• Visualization of generated feature loading heatmap

2. Downstream analysis (R)

• result_Figure2.R (from momlin_out/)
  Logistic regression classification

• result_Figure3.R (from momlin_out/)
  Feature loading heatmap

• result_Figure4.R (from momlin_out/)
  Multimodal biomarker network

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Contact

If you have any questions, feel free to contact:

Author: Md. Mamunur Rashid
📧 mamun.stat92@gmail.com
📅 2024

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R implementation

MOMLIN R version is available here:
https://github.com/mamun41/MOMLIN-R-version