bluehead_methylome_bioinformatics

This repository is intended to catalog all bioinformatic work for the Bluehead Wrasse Sex Change Genomics Research Project. All method details, including scripts, log files, and various text files, will be included here.

Components of Analysis

The following categories will be included, each of which will be organised into a separate subfolder:

• RNA-seq and Methylome analysis

  • RNA-seq Data QC and Expression Quantification

  • RNA-seq Global Expression Analysis

  • RNA-seq Differential Expression Analysis

  • Methylome Analysis

• Genome Assembly

• Genome Scaffolding and Gapfilling

• Genome Annotation