Kundaje Lab
Compbio and machine learning code repositories from the Kundaje Lab at Stanford Genetics and Computer Science Depts.
- 150 followers
- Stanford University
- https://kundajelab.github.io/
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atac_dnase_pipelines
atac_dnase_pipelines PublicATAC-seq and DNase-seq processing pipeline
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chrombpnet
chrombpnet PublicBias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
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- kundajelab.github.io Public
kundajelab/kundajelab.github.io’s past year of commit activity - neuro-variants Public
This repository contains all scripts for the manuscript "Mapping the regulatory effects of common and rare non-coding variants across cellular and developmental contexts in the brain and heart" by Marderstein, Kundu et al.
kundajelab/neuro-variants’s past year of commit activity - variant-scorer Public
A framework to score and analyze variant effects genome-wide using ChromBPNet models
kundajelab/variant-scorer’s past year of commit activity - bpnet-refactor Public
kundajelab/bpnet-refactor’s past year of commit activity - v2f-frontend Public
kundajelab/v2f-frontend’s past year of commit activity - chrombpnet Public
Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)
kundajelab/chrombpnet’s past year of commit activity
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