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1. dacapo dacapo Public

   A framework for easy application of established machine learning techniques on large, multi-dimensional images.

   Python 59 10

2. cellmap-models cellmap-models Public

   Repository of model architectures and network weights used for CellMap segmentations.

   Python 13

3. cellmap-data cellmap-data Public

   Utility for loading CellMap data for machine learning training, utilizing PyTorch, TensorStore, Xarray, and PyDantic.

   Python 4 2

4. cellmap-segmentation-challenge cellmap-segmentation-challenge Public

   Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post…

   Python 36 10